RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SIRT7Q9NRC8 400 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ADA2Q9NZK5 511 aa12.14□□□□□ -0.47
CDK5RAP3-226ENST00000583182 KMT2CQ8NEZ4 4911 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 TRBV4-1A0A0J9YWV2 114 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 hCG_1807616A0A1W2PRN6 198 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 GGT3PA6NGU5 568 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 A6NLC8 198 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RNASEK-C17orf49H0YIS7 233 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 TGFBR2P37173 567 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 TPTEP56180 551 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 LIPEQ05469 1076 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SF3A3Q12874 501 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■□□□ 14.2
CDK5RAP3-226ENST00000583182 RFX4Q33E94 735 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FGD3Q5JSP0 725 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 GLYATL3Q5SZD4 288 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 METAP1DQ6UB28 335 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 CYP4Z1Q86W10 505 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OR2AJ1Q8NGZ0 328 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RCN3Q96D15 328 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FN3KQ9H479 309 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RPRD1BQ9NQG5 326 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 MRPL22Q9NWU5 206 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 MRPL15Q9P015 296 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ONECUT1Q9UBC0 465 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
CDK5RAP3-226ENST00000583182 A0A1W2PRD5 423 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 A0A1W2PRF3 423 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 A0A1W2PRM7 423 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RENP00797 406 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OPN1MWP04001 364 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OPN1MW2P0DN77 364 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OPN1MW3P0DN78 364 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 KLRD1Q13241 179 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 C11orf53Q8IXP5 236 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 Q8N7P7 452 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 CCL13Q99616 98 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NDUFAF4Q9P032 175 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 DNAJB11Q9UBS4 358 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FBLN5Q9UBX5 448 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SIGLEC9Q9Y336 463 aa12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 CAB39Q9Y376 341 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NME4O00746 187 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NPFFO15130 113 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ARPC3O15145 178 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 GSTA4O15217 222 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 PIN1P1O15428 100 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 DIRAS1O95057 198 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 HLA-DQA2P01906 255 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OTX1P32242 354 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RPS27P42677 84 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 HERPUD1Q15011 391 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 PCK2Q16822 640 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 WDR38Q5JTN6 314 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 LNX2Q8N448 690 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 PNKDQ8N490 385 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 GALNT4Q8N4A0 578 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SDR9C7Q8NEX9 313 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OR56B2PQ8NGI1 322 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FANK1Q8TC84 345 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SPTSSAQ969W0 71 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 SEH1LQ96EE3 360 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 FUZQ9BT04 418 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 PPA2Q9H2U2 334 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 MRGBPQ9NV56 204 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 AP3M1Q9Y2T2 418 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 DNAH3Q8TD57 4116 aa12.11□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ANKRD61A6NGH8 418 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 HMGB1P1B2RPK0 211 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 BHLHE40O14503 412 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 GPR37O15354 613 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 PSKH1P11801 424 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 NCK1P16333 377 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 RHCEP18577 417 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 AMY2BP19961 511 aa12.1□□□□□ -0.47
CDK5RAP3-226ENST00000583182 EEF1B2P24534 225 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms