RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZFP36P26651 326 aaKnown RBP16.38■□□□□ 0.21
SREBF1-220ENST00000581707 PMELP40967 661 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 RPS7P62081 194 aaKnown RBP16.38■□□□□ 0.21
SREBF1-220ENST00000581707 C1orf229Q6ZS94 237 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-220ENST00000581707 C1orf87Q8N0U7 546 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 RFLNBQ8N5W9 214 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 TEX29Q8N6K0 151 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 OR56B2PQ8NGI1 322 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 SPSB4Q96A44 273 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 DUS3LQ96G46 650 aaKnown RBP16.38■□□□□ 0.21
SREBF1-220ENST00000581707 TMPRSS13Q9BYE2 586 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 DNAJC27Q9NZQ0 273 aa16.38■□□□□ 0.21
SREBF1-220ENST00000581707 MRPL15Q9P015 296 aaKnown RBP16.38■□□□□ 0.21
SREBF1-220ENST00000581707 IRF2P14316 349 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 SLC2A5P22732 501 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 DDOSTP39656 456 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 NAA10P41227 235 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 ZNF121P58317 390 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 ESRRGP62508 458 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 SRSF2Q01130 221 aaKnown RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 APOFQ13790 326 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 PTGES3Q15185 160 aaKnown RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 TIGD6Q17RP2 521 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 FAM57BQ71RH2 274 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 PRSS45Q7RTY3 260 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 AMIGO2Q86SJ2 522 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 OR52H1Q8NGJ2 320 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 OR11L1Q8NGX0 322 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 SGK3Q96BR1 496 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 ADAT1Q9BUB4 502 aaKnown RBP16.37■□□□□ 0.21
SREBF1-220ENST00000581707 TMEM165Q9HC07 324 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 KRT84Q9NSB2 600 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 UFSP2Q9NUQ7 469 aa16.37■□□□□ 0.21
SREBF1-220ENST00000581707 PPIAL4EA0A075B759 164 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 LOC105371242A0A075B767 164 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 PPIAL4CA0A0B4J2A2 164 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 CEACAM18A8MTB9 384 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 F5H0A9 414 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-220ENST00000581707 PPIAL4DF5H284 164 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 CIB2O75838 187 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 PPIAL4FP0DN26 164 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 FCGR1AP12314 374 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 SCGB2A2Q13296 93 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 MPPED2Q15777 294 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 PRAMEF6Q5VXH4 476 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 LIPNQ5VXI9 398 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 SLC16A9Q7RTY1 509 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 KLBQ86Z14 1044 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 PHC2Q8IXK0 858 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 SPERTQ8NA61 448 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 Q8TCH9 128 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 REEP6Q96HR9 211 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 TEAD3Q99594 435 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 OR10A2Q9H208 303 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 C7orf69Q9H7B7 122 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 BRD7Q9NPI1 651 aa16.36■□□□□ 0.21
SREBF1-220ENST00000581707 TCF21O43680 179 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 MITFO75030 526 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-220ENST00000581707 FAM20BO75063 409 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 FSTL3O95633 263 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 WNT2P09544 360 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 CFL1P23528 166 aaKnown RBP16.35■□□□□ 0.21
SREBF1-220ENST00000581707 CPT2P23786 658 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 SEC61A1P61619 476 aaKnown RBP16.35■□□□□ 0.21
SREBF1-220ENST00000581707 FAM3AP98173 230 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 KRTAP24-1Q3LI83 254 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 ESCO2Q56NI9 601 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 FAM201AQ5SY85 155 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 PLPP7Q8NBV4 271 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 LRTOMTQ8WZ04 291 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 PGAM5Q96HS1 289 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 TMEM246Q9BRR3 403 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 PRRG3Q9BZD7 231 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 FN3KRPQ9HA64 309 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 ZNF319Q9P2F9 582 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 LAMP5Q9UJQ1 280 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 KLHDC2Q9Y2U9 406 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 POLR3KQ9Y2Y1 108 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-220ENST00000581707 PPIAL4AQ9Y536 164 aa16.35■□□□□ 0.21
SREBF1-220ENST00000581707 DOCK11Q5JSL3 2073 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-220ENST00000581707 ANKRD30BLA7E2S9 258 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 PRKYO43930 277 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 PTBP3O95758 552 aaKnown RBP16.34■□□□□ 0.21
SREBF1-220ENST00000581707 ALOX5APP20292 161 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 HCCSP53701 268 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 KDM4DQ6B0I6 523 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 C1QL2Q7Z5L3 287 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 DVL3Q92997 716 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-220ENST00000581707 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 GABARAPL1Q9H0R8 117 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 MMP26Q9NRE1 261 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 MIOXQ9UGB7 285 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 OPN4Q9UHM6 478 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 LRCH1Q9Y2L9 728 aa16.34■□□□□ 0.21
SREBF1-220ENST00000581707 hCG_38984A0A1B0GV85 526 aa16.33■□□□□ 0.2
SREBF1-220ENST00000581707 CCDC182A6NF36 153 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms