RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 LRRC42Q9Y546 428 aa17.58■□□□□ 0.4
CCDC42-203ENST00000581598 GMPPBQ9Y5P6 360 aa17.58■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF12P17014 697 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 EFNB1P98172 346 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF691Q5VV52 312 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 LINC00346Q8IVM7 164 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 SDR9C7Q8NEX9 313 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 OR52E2Q8NGJ4 325 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 OR2AJ1Q8NGZ0 328 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 DVL3Q92997 716 aaPredicted RBP17.57■□□□□ 0.4
CCDC42-203ENST00000581598 DDOQ99489 341 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 CDADC1Q9BWV3 514 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 HCAR1Q9BXC0 346 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 TEX12Q9BXU0 123 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 ANKRD60Q9BZ19 345 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 PRRG3Q9BZD7 231 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 CMC2Q9NRP2 79 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 LRCH1Q9Y2L9 728 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 DOCK11Q5JSL3 2073 aa17.57■□□□□ 0.4
CCDC42-203ENST00000581598 TMEM89A2RUT3 159 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 TRAPPC2LH3BP13 241 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 MLNRO43193 412 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 GNAO1P09471 354 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 FPR2P25090 351 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 CDC42P60953 191 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF362Q5T0B9 420 aaPredicted RBP17.56■□□□□ 0.4
CCDC42-203ENST00000581598 BPIFB2Q8N4F0 458 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 CELF2-AS1Q8N7Q2 184 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 OR10AD1Q8NGE0 317 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 FAM81AQ8TBF8 368 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 SLC6A7Q99884 636 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 MMP26Q9NRE1 261 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 TMEM100Q9NV29 134 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 MRPL22Q9NWU5 206 aaKnown RBP17.56■□□□□ 0.4
CCDC42-203ENST00000581598 INSIG2Q9Y5U4 225 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 HSPE1-MOB4S4R3N1 261 aa17.56■□□□□ 0.4
CCDC42-203ENST00000581598 CEACAM18A8MTB9 384 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 DENRO43583 198 aaKnown RBP17.55■□□□□ 0.4
CCDC42-203ENST00000581598 CLIC3O95833 236 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 WNT2P09544 360 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 RBMXP38159 391 aaKnown RBP17.55■□□□□ 0.4
CCDC42-203ENST00000581598 GATA4P43694 442 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 SEC61A1P61619 476 aaKnown RBP17.55■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF154Q13106 437 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 GK2Q14410 553 aaPredicted RBP17.55■□□□□ 0.4
CCDC42-203ENST00000581598 ESCO2Q56NI9 601 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 SETD9Q8NE22 299 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 TRUB1Q8WWH5 349 aaKnown RBP17.55■□□□□ 0.4
CCDC42-203ENST00000581598 APOL4Q9BPW4 351 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 FN3KQ9H479 309 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 TMEM165Q9HC07 324 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 TVP23BQ9NYZ1 205 aa17.55■□□□□ 0.4
CCDC42-203ENST00000581598 F5H5K5 113 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 H0YL77 283 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 RGS9O75916 674 aaPredicted RBP17.54■□□□□ 0.4
CCDC42-203ENST00000581598 IFNGP01579 166 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 HLA-DQA2P01906 255 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF823P16415 610 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 GABRB1P18505 474 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 MYF6P23409 242 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 CFPP27918 469 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 TPTEP56180 551 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 ACTG1P63261 375 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 MALLQ13021 153 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 SLC35F1Q5T1Q4 408 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 C1orf87Q8N0U7 546 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 OR8J1Q8NGP2 316 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 OR2T4Q8NH00 348 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 ZNF420Q8TAQ5 688 aaPredicted RBP17.54■□□□□ 0.4
CCDC42-203ENST00000581598 FBLIM1Q8WUP2 373 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 ERGIC1Q969X5 290 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 MAP6Q96JE9 813 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 Q9H521 79 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 WDR76Q9H967 626 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 DDX28Q9NUL7 540 aaKnown RBP17.54■□□□□ 0.4
CCDC42-203ENST00000581598 AUP1Q9Y679 476 aa17.54■□□□□ 0.4
CCDC42-203ENST00000581598 LRRC30A6NM36 301 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 RIIAD1A6NNX1 92 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 F5H5P2 479 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 M0R129 80 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 PRKYO43930 277 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 OTX1P32242 354 aaPredicted RBP17.53■□□□□ 0.4
CCDC42-203ENST00000581598 CD200P41217 278 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 ISL1P61371 349 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 SNRPGP62308 76 aaKnown RBP17.53■□□□□ 0.4
CCDC42-203ENST00000581598 DBPQ10586 325 aaPredicted RBP17.53■□□□□ 0.4
CCDC42-203ENST00000581598 SNAPC1Q16533 368 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 ENTHD1Q8IYW4 607 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 C8orf59Q8N0T1 100 aaPredicted RBP17.53■□□□□ 0.4
CCDC42-203ENST00000581598 ZDHHC22Q8N966 263 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 BHLHE23Q8NDY6 225 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 RHOXF1Q8NHV9 184 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 TMEM163Q8TC26 289 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 Q8TCH9 128 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 SPTSSAQ969W0 71 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 MRI1Q9BV20 369 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 IMPAD1Q9NX62 359 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 MIOXQ9UGB7 285 aa17.53■□□□□ 0.4
CCDC42-203ENST00000581598 OR5V1Q9UGF6 321 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms