RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 LOXP28300 417 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 CD70P32970 193 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 BMI1P35226 326 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 CLDN18P56856 261 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 PITPNAQ00169 270 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 DNAJC3Q13217 504 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 SLC39A6Q13433 755 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 HIKESHIQ53FT3 197 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 AP1ARQ63HQ0 302 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 TTC19Q6DKK2 380 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 WDR82Q6UXN9 313 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 UNC93AQ86WB7 457 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 MYOCDQ8IZQ8 938 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 CMTM8Q8IZV2 173 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF615Q8N8J6 731 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 OR10W1Q8NGF6 305 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 ITFG1Q8TB96 612 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 GPR21Q99679 349 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 DOK1Q99704 481 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 TBL1YQ9BQ87 522 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 TIMM29Q9BSF4 260 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 NAA50Q9GZZ1 169 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 CRLF2Q9HC73 371 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 RHBDD3Q9Y3P4 386 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 COMMD3-BMI1R4GMX3 469 aa2.67□□□□□ -1.98
SMCHD1-205ENST00000581383 IGHV3OR16-9A0A0B4J2B5 98 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 A0A1W2PQ67 120 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 SLC19A2O60779 497 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 GLSO94925 669 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 HLA-DQB1P01920 261 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 GLAP06280 429 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 POLR2MP0CAP2 368 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 RAB5AP20339 215 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 CD82P27701 267 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 GGT2P36268 569 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 PPICP45877 212 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 TFDP2Q14188 446 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 PIGHQ14442 188 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 LY6EQ16553 131 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 RNASE13Q5GAN3 156 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 RWDD4Q6NW29 188 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 KIF2BQ8N4N8 673 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 TTLQ8NG68 377 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 OR1J4Q8NGS1 313 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 CSPG4P5Q96PW8 444 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 RSG1Q9BU20 258 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 C1orf198Q9H425 327 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 RPRD1BQ9NQG5 326 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 FBXO6Q9NRD1 293 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 CHRAC1Q9NRG0 131 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 ENOPH1Q9UHY7 261 aa2.66□□□□□ -1.98
SMCHD1-205ENST00000581383 IGLV2-18A0A075B6J9 118 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 TRAV40A0A0B4J280 105 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 GOLGA6L7A0A1B0GV03 622 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 OR5H1A6NKK0 313 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 TNFRSF11BO00300 401 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC16A7O60669 478 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 MPDU1O75352 247 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 RBBP9O75884 186 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 RCBTB2O95199 551 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 ME2P23368 584 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 HTR1DP28221 377 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 MYCNOSP40205 109 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 AP1S2P56377 157 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 SPAG1Q07617 926 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 DOC2AQ14183 400 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 HMGN2P46Q86SG4 172 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 OSR2Q8N2R0 312 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF645Q8N7E2 425 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 UBAC2Q8NBM4 344 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 OR13G1Q8NGZ3 307 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 GHSRQ92847 366 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 SLC25A46Q96AG3 418 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 ISG20Q96AZ6 181 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 CERS2Q96G23 380 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 SCGB3A2Q96PL1 93 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 CDX2Q99626 313 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 DEFB129Q9H1M3 183 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 BLZF1Q9H2G9 400 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 CD209Q9NNX6 404 aa2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 EXOSC4Q9NPD3 245 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-205ENST00000581383 AHDC1Q5TGY3 1603 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 IGKV1-27A0A075B6S5 117 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF850A8MQ14 1090 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ZNF99A8MXY4 864 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 RRP8O43159 456 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 RAD1O60671 282 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 EIF1BO60739 113 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 HSBP1O75506 76 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 SERPINB7O75635 380 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 FARS2O95363 451 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 TGM6O95932 706 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 IGLV3-25P01717 112 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 CD74P04233 296 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 IL4P05112 153 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 IL1RNP18510 177 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 EIF1P41567 113 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 ATP6V0D1P61421 351 aa2.64□□□□□ -1.99
SMCHD1-205ENST00000581383 PPIDQ08752 370 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms