RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 IRF3Q14653 427 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 OR2G6Q5TZ20 316 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 OR2T2Q6IF00 324 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 PGAP1Q75T13 922 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 PRSS35Q8N3Z0 413 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 OR2G2Q8NGZ5 317 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 OR52N1Q8NH53 320 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
MKS1-210ENST00000581180 MYDGFQ969H8 173 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 MBD6Q96DN6 1003 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 SOX7Q9BT81 388 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 CDCA4Q9BXL8 241 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 CACNG6Q9BXT2 260 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
MKS1-210ENST00000581180 ERVK-18Q9QC07 812 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
MKS1-210ENST00000581180 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.34
MKS1-210ENST00000581180 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 E9PI62 339 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 H7C417 338 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 M0R233 179 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 KIR3DL2P43630 455 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 NANOS3P60323 173 aaKnown RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 TNK1Q13470 666 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 MOGQ16653 247 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 WDR38Q5JTN6 314 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 TMPRSS11AQ6ZMR5 421 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 MRPL21Q7Z2W9 205 aaKnown RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 CDH24Q86UP0 819 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 GTF3AQ92664 365 aaKnown RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 YTHDF1Q9BYJ9 559 aaKnown RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 CHCHD3Q9NX63 227 aaKnown RBP12.89□□□□□ -0.35
MKS1-210ENST00000581180 ZNF391Q9UJN7 358 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 DYSFO75923 2080 aa12.89□□□□□ -0.35
MKS1-210ENST00000581180 A0A1B0GTI1 187 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 RGS10O43665 173 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 LILRA1O75019 489 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 MT-ND5P03915 603 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 HTR1AP08908 422 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 BMP4P12644 408 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 SELEP16581 610 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 CFL1P23528 166 aaKnown RBP12.88□□□□□ -0.35
MKS1-210ENST00000581180 LIPAP38571 399 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 TGM4P49221 684 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 CCR9P51686 369 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 MRPL28Q13084 256 aaKnown RBP12.88□□□□□ -0.35
MKS1-210ENST00000581180 DOC2BQ14184 412 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 OR8B8Q15620 311 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 BCL2L15Q5TBC7 163 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 Q6ZR03 302 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 Q6ZSR3 168 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 OR5AS1Q8N127 324 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 ZCCHC24Q8N2G6 241 aaKnown RBP12.88□□□□□ -0.35
MKS1-210ENST00000581180 NANOGP1Q8N7R0 232 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 PLPP7Q8NBV4 271 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 RPS4Y2Q8TD47 263 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 HAVCR2Q8TDQ0 301 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 CYSLTR2Q9NS75 346 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 BEX4Q9NWD9 120 aaPredicted RBP12.88□□□□□ -0.35
MKS1-210ENST00000581180 FRRS1LQ9P0K9 344 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 CGGBP1Q9UFW8 167 aaPredicted RBP12.88□□□□□ -0.35
MKS1-210ENST00000581180 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
MKS1-210ENST00000581180 A0A1B0GWJ7 208 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 OR4C45A6NMZ5 311 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 C17orf100A8MU93 164 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 LALBAP00709 142 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 MT-ND2P03891 347 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 ADH4P08319 380 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 NAT2P11245 290 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 CCL1P22362 96 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 GSK3AP49840 483 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 GTF2A1P52655 376 aaPredicted RBP12.87□□□□□ -0.35
MKS1-210ENST00000581180 GBX2P52951 348 aaPredicted RBP12.87□□□□□ -0.35
MKS1-210ENST00000581180 GABARAPL2P60520 117 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 ALKBH1Q13686 389 aaKnown RBP12.87□□□□□ -0.35
MKS1-210ENST00000581180 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 GFOD2Q3B7J2 385 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 XAF1Q6GPH4 301 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 KRT74Q7RTS7 529 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 OR8G5Q8NG78 346 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
MKS1-210ENST00000581180 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms