RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PCK2Q16822 640 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF660Q6AZW8 331 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 LYPD6Q86Y78 171 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 LRRC18Q8N456 261 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 WDSUB1Q8N9V3 476 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR8B12Q8NGG6 310 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 MRPL13Q9BYD1 178 aaKnown RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 TGIF2Q9GZN2 237 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ESRP2Q9H6T0 727 aaKnown RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ALKBH4Q9NXW9 302 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 SEMA5BQ9P283 1151 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 EDARQ9UNE0 448 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 B3GALT5Q9Y2C3 310 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 LY6G6EA0A0G2JKS1 128 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 A0A1B0GTI1 187 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 EEF1E1-BLOC1S5C9J1V9 151 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 K7ESF4 209 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 TRAF3IP2O43734 574 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 AQP8O94778 261 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF20P17024 532 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 CD34P28906 385 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 MEOX2P50222 304 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZP4Q12836 540 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF260Q3ZCT1 412 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 C1orf100Q5SVJ3 147 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 MISPQ8IVT2 679 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 STPG2Q8N412 459 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR10K1Q8NGX5 313 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR2AJ1Q8NGZ0 328 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM41AQ96HV5 264 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF75AQ96N20 296 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 REG4Q9BYZ8 158 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 SLC17A5Q9NRA2 495 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 PCDHB16Q9NRJ7 776 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 HPF1Q9NWY4 346 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 MBD2Q9UBB5 411 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 KCNMB2Q9Y691 235 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 U3KQA8 63 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 IGLV3-12A0A075B6K2 115 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 A0A0A6YYD4 124 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 MEGF11A6BM72 1044 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR14I1A6ND48 311 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 METTL21EPA6NDL7 271 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR5H14A6NHG9 310 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZFAND5O76080 213 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 PGA4P0DJD7 388 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 PGA3P0DJD8 388 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF43P17038 809 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 CFPP27918 469 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ATP1B3P54709 279 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 CLDN17P56750 224 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 RABEPKQ7Z6M1 372 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR4K17Q8NGC6 315 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 OR5D14Q8NGL3 314 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 NUBPLQ8TB37 319 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 AQP3Q92482 292 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 THRSPQ92748 146 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZBTB8AQ96BR9 441 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 ZC3H10Q96K80 434 aaKnown RBP9.28□□□□□ -0.92
TOP3A-209ENST00000580095 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 FAM117AQ9C073 453 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 FN3KRPQ9HA64 309 aa9.28□□□□□ -0.92
TOP3A-209ENST00000580095 EML6Q6ZMW3 1958 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 C13orf42A0A1B0GVH6 325 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 PATE3B3GLJ2 98 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 F5H5K5 113 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 PMS2P2O95744 297 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 IGHG1P01857 330 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 CFIP05156 583 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 HCKP08631 526 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 P2RY4P51582 365 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ACY1Q03154 408 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 KMT5CQ86Y97 462 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 SLC22A24Q8N4F4 322 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 NAXEQ8NCW5 288 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 MARCH1Q8TCQ1 289 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ROBO4Q8WZ75 1007 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 GPER1Q99527 375 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 RAB22AQ9UL26 194 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 NCOA6Q14686 2063 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-209ENST00000580095 SULT2B1O00204 365 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF208O43345 1280 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 STK17BO94768 372 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 WDPCPO95876 746 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 FABP1P07148 127 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ERCC1P07992 297 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF17P17021 662 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 SLC6A9P48067 706 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 NPY4RP50391 375 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 GABREP78334 506 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 GK2Q14410 553 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-209ENST00000580095 PLAC9Q5JTB6 97 aa9.27□□□□□ -0.93
TOP3A-209ENST00000580095 RGS7BPQ6MZT1 257 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-209ENST00000580095 TFAP2EQ6VUC0 442 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms