RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ROS1P08922 2347 aa13.65□□□□□ -0.22
CSNK1D-212ENST00000580061 PNMA8CA0A1B0GUJ8 204 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 hCG_38984A0A1B0GV85 526 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 TMEM212A6NML5 194 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 VSTM5A8MXK1 200 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CD1AP06126 327 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 OR4A8P0C604 315 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 RAC2P15153 192 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CELP19835 753 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CCL1P22362 96 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CFL1P23528 166 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 GCH1P30793 250 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 APOBEC3AP31941 199 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 FAM3AP98173 230 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 SLC3A1Q07837 685 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 PSG7Q13046 419 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 TPBGQ13641 420 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 NEDD8Q15843 81 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 TMEM255AQ5JRV8 349 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 TMEM244Q5VVB8 128 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 HIST2H2BCQ6DN03 193 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 RDH10Q8IZV5 341 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 ZNF676Q8N7Q3 588 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 PLPP7Q8NBV4 271 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 OR5AK2Q8NH90 309 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 SYNPRQ8TBG9 265 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 FBXW5Q969U6 566 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 HAVCR1Q96D42 359 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CMBLQ96DG6 245 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 PGLYRP3Q96LB9 341 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 PDCD1LG2Q9BQ51 273 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 SOX7Q9BT81 388 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 COMMD4Q9H0A8 199 aa13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-212ENST00000580061 PTPN13Q12923 2485 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 IGLV3-9A0A075B6K5 115 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 HS3ST1O14792 307 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 INMTO95050 263 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 CLPTM1O96005 669 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 CPEP16870 476 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 PRSS12P56730 875 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 GPR50Q13585 617 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 ARMCX4Q5H9R4 360 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 Q6ZSR3 168 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 COMMD2Q86X83 199 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 GHSRQ92847 366 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 UFD1Q92890 307 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 MUL1Q969V5 352 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 MARVELD3Q96A59 401 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 FAM71F1Q96KD3 344 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 MRPS26Q9BYN8 205 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 MRPL37Q9BZE1 423 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 VCX3AQ9NNX9 186 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 DUSP13Q9UII6 198 aa13.63□□□□□ -0.23
CSNK1D-212ENST00000580061 LRBAP50851 2863 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 A0A1B0GVI7 797 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 LOC107986453A0A1B0GWG9 222 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 LOC390937A0A1W2PQ73 354 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 SYT7O43581 403 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 JUNBP17275 347 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 KITLGP21583 273 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 ACHEP22303 614 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 PSMB9P28065 219 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 TTKP33981 857 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 SERPINF1P36955 418 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 GSK3AP49840 483 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 GP2P55259 537 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 KLF3P57682 345 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 TNK1Q13470 666 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 OR8B8Q15620 311 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 LIPKQ5VXJ0 399 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 ZNF787Q6DD87 383 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 OR2T2Q6IF00 324 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 DOK3Q7L591 496 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 ZNF611Q8N823 705 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 OR14K1Q8NGZ2 314 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 OR10AC1Q8NH08 325 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 RGP1Q92546 391 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 SYT3Q9BQG1 590 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 PLK3Q9H4B4 646 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 PLEKHF2Q9H8W4 249 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 PURGQ9UJV8 347 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 ZNF281Q9Y2X9 895 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 V9GYS6 101 aa13.62□□□□□ -0.23
CSNK1D-212ENST00000580061 NBPF19A0A087WUL8 3843 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 GGT3PA6NGU5 568 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 CD300LBA8K4G0 201 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 IQCF6A8MYZ5 107 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 H3BSH0 61 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 MTRF1O75570 445 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 DHRS3O75911 302 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 SELEP16581 610 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 SSTR2P30874 369 aa13.61□□□□□ -0.23
CSNK1D-212ENST00000580061 EVX1P49640 407 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms