RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 NOP16Q9Y3C1 178 aaKnown RBP16.49■□□□□ 0.23
SS18-209ENST00000578595 LRP12Q9Y561 859 aa16.49■□□□□ 0.23
SS18-209ENST00000578595 TMEM14AQ9Y6G1 99 aa16.49■□□□□ 0.23
SS18-209ENST00000578595 ALPLP05186 524 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 ATP6V1E1P36543 226 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 PSMA6P60900 246 aaKnown RBP16.48■□□□□ 0.23
SS18-209ENST00000578595 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 COMMD2Q86X83 199 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 SLC35F2Q8IXU6 374 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 PQLC1Q8N2U9 271 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 OR52H1Q8NGJ2 320 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 OR51G2Q8NGK0 314 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 EME1Q96AY2 570 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 MROQ9BYG7 248 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 SHARPINQ9H0F6 387 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 ZNF665Q9H7R5 613 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 USE1Q9NZ43 259 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 PCDHB10Q9UN67 800 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 NPTNQ9Y639 398 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 ARHGAP32A7KAX9 2087 aa16.48■□□□□ 0.23
SS18-209ENST00000578595 ANKRD30BLA7E2S9 258 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 ZNF670-ZNF695F2Z2N8 137 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 CRLF1O75462 422 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 SBK2P0C263 348 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 ALOX5APP20292 161 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 MMP16P51512 607 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 CHRFAM7AQ494W8 412 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 AADACL4Q5VUY2 407 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 PRAMEF6Q5VXH4 476 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 RHOUQ7L0Q8 258 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 OR8J1Q8NGP2 316 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 TBX5Q99593 518 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 REPIN1Q9BWE0 567 aaKnown RBP16.47■□□□□ 0.23
SS18-209ENST00000578595 SLC22A4Q9H015 551 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 NIPAL2Q9H841 368 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 UFSP2Q9NUQ7 469 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 COPS3Q9UNS2 423 aa16.47■□□□□ 0.23
SS18-209ENST00000578595 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.46■□□□□ 0.23
SS18-209ENST00000578595 B4DSR2 109 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 FAM157AC9JC47 383 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 APOL3O95236 402 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 IRF2P14316 349 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 HNF1AP20823 631 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
SS18-209ENST00000578595 RIDAP52758 137 aaKnown RBP16.46■□□□□ 0.23
SS18-209ENST00000578595 CXCR4P61073 352 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 ZBTB49Q6ZSB9 765 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 IL17RELQ6ZVW7 336 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 GLCCI1Q86VQ1 547 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 ASB17Q8WXJ9 295 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 BEX2Q9BXY8 128 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 GCM1Q9NP62 436 aa16.46■□□□□ 0.23
SS18-209ENST00000578595 WARS2Q9UGM6 360 aaKnown RBP16.46■□□□□ 0.23
SS18-209ENST00000578595 LRRC30A6NM36 301 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 PHYHO14832 338 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 CYB5R3P00387 301 aaPredicted RBP16.45■□□□□ 0.22
SS18-209ENST00000578595 GNALP38405 381 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 ZNF829Q3KNS6 432 aaPredicted RBP16.45■□□□□ 0.22
SS18-209ENST00000578595 ZNF322Q6U7Q0 402 aaPredicted RBP16.45■□□□□ 0.22
SS18-209ENST00000578595 RFLNBQ8N5W9 214 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 OR11L1Q8NGX0 322 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 OR8S1Q8NH09 359 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 RFKQ969G6 155 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 SGK3Q96BR1 496 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 OR8B4Q96RC9 309 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 PAPOLGQ9BWT3 736 aaKnown RBP16.45■□□□□ 0.22
SS18-209ENST00000578595 ADGRL4Q9HBW9 690 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 MRPL15Q9P015 296 aaKnown RBP16.45■□□□□ 0.22
SS18-209ENST00000578595 CDC42EP3Q9UKI2 254 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 GMPPBQ9Y5P6 360 aa16.45■□□□□ 0.22
SS18-209ENST00000578595 TMEM269A0A1B0GVZ9 245 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 A6NLC8 198 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 IFNL4K9M1U5 179 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 ZNF205O95201 554 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 DDOSTP39656 456 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 GSK3AP49840 483 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 BTG1P62324 171 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 FAM3AP98173 230 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 POU4F2Q12837 409 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 ZSCAN26Q16670 478 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 ZNF679Q8IYX0 411 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 C1orf87Q8N0U7 546 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 BOLLQ8N9W6 283 aaKnown RBP16.44■□□□□ 0.22
SS18-209ENST00000578595 OR10H4Q8NGA5 316 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 OR8B12Q8NGG6 310 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 OR51F2Q8NH61 342 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 SPSB4Q96A44 273 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 CLN6Q9NWW5 311 aa16.44■□□□□ 0.22
SS18-209ENST00000578595 hCG_38984A0A1B0GV85 526 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 ANKRD65E5RJM6 399 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 TMEM178BH3BS89 294 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 GMDSO60547 372 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 IGHV2-5P01817 119 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 GRPP07492 148 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 MSMBP08118 114 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 ANPEPP15144 967 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 HTR1FP30939 366 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 CD200P41217 278 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 LMO4P61968 165 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 EFNB1P98172 346 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms