RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RIBC2Q9H4K1 309 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 IQCF6A8MYZ5 107 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 H2BFMP0C1H6 154 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 TNFRSF1AP19438 455 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 CX3CR1P49238 355 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 EFNB1P98172 346 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 TMEM163Q8TC26 289 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 CCL17Q92583 94 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 SUCNR1Q9BXA5 334 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 GABARAPL3Q9BY60 117 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 YIPF3Q9GZM5 350 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 TMEM100Q9NV29 134 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 LAMP5Q9UJQ1 280 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 N6AMT1Q9Y5N5 214 aa13.52□□□□□ -0.25
VAPA-204ENST00000577901 SLC22A31A6NKX4 558 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 J3QLI3 93 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 ALPLP05186 524 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
VAPA-204ENST00000577901 NAA10P41227 235 aaPredicted RBP13.51□□□□□ -0.25
VAPA-204ENST00000577901 RAD23AP54725 363 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 SLC3A1Q07837 685 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 SNAI3Q3KNW1 292 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 Q6ZR03 302 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 MEPCEQ7L2J0 689 aaKnown RBP13.51□□□□□ -0.25
VAPA-204ENST00000577901 SPRYD4Q8WW59 207 aaPredicted RBP13.51□□□□□ -0.25
VAPA-204ENST00000577901 STMN2Q93045 179 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 TIMD4Q96H15 378 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 IL4I1Q96RQ9 567 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 SLC6A7Q99884 636 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 IL19Q9UHD0 177 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 WIPI2Q9Y4P8 454 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 TMEM14AQ9Y6G1 99 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 DYSFO75923 2080 aa13.51□□□□□ -0.25
VAPA-204ENST00000577901 GGT3PA6NGU5 568 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 EI24O14681 340 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 XRCC2O43543 280 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 IGHV2-5P01817 119 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 ANXA2P07355 339 aaKnown RBP13.5□□□□□ -0.25
VAPA-204ENST00000577901 SLC2A1P11166 492 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 ADRA2CP18825 462 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 ALOX5APP20292 161 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 OPRL1P41146 370 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 AADACL4Q5VUY2 407 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 DCAF12L2Q5VW00 463 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
VAPA-204ENST00000577901 GID4Q8IVV7 300 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 BPIFB2Q8N4F0 458 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 BHLHE23Q8NDY6 225 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 OR52H1Q8NGJ2 320 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 RAB1CQ92928 201 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 AMELYQ99218 206 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 SLC30A2Q9BRI3 323 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 OPA3Q9H6K4 179 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 CACNG2Q9Y698 323 aa13.5□□□□□ -0.25
VAPA-204ENST00000577901 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 TBX1O43435 398 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 BAG2O95816 211 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 MRPL3P09001 348 aaKnown RBP13.49□□□□□ -0.25
VAPA-204ENST00000577901 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
VAPA-204ENST00000577901 CDC42P60953 191 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 ZNF92Q03936 586 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 TIGD6Q17RP2 521 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 AWAT1Q58HT5 328 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 GLYATL3Q5SZD4 288 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 KRT77Q7Z794 578 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 PQLC1Q8N2U9 271 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 OR8J1Q8NGP2 316 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 OR2AE1Q8NHA4 323 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
VAPA-204ENST00000577901 OR2V2Q96R30 315 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 CNN2Q99439 309 aaKnown RBP13.49□□□□□ -0.25
VAPA-204ENST00000577901 MROQ9BYG7 248 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 SLC22A4Q9H015 551 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 ESM1Q9NQ30 184 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
VAPA-204ENST00000577901 NOP16Q9Y3C1 178 aaKnown RBP13.49□□□□□ -0.25
VAPA-204ENST00000577901 CD300LBA8K4G0 201 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 M0R129 80 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
VAPA-204ENST00000577901 GATA3P23771 443 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 HCCSP53701 268 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 ZNF121P58317 390 aaPredicted RBP13.48□□□□□ -0.25
VAPA-204ENST00000577901 DEGS2Q6QHC5 323 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 FAM57BQ71RH2 274 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
VAPA-204ENST00000577901 ZDHHC22Q8N966 263 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 ITLN1Q8WWA0 313 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 ASB17Q8WXJ9 295 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
VAPA-204ENST00000577901 MNTQ99583 582 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms