RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CACNG2Q9Y698 323 aa8.05□□□□□ -1.12
NPLOC4-219ENST00000576713 ACANP16112 2415 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 LOC100130705A0A1B0GUX0 176 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF878C9JN71 531 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 M0R233 179 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 SLC16A6O15403 523 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 TMCC2O75069 709 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 WBP4O75554 376 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 GNAO1P09471 354 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 SBK2P0C263 348 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 HTR1FP30939 366 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 EFNA4P52798 201 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 BLVRAP53004 296 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 NUDT6P53370 316 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 RAD23AP54725 363 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF92Q03936 586 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 GK2Q14410 553 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 SMN1Q16637 294 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 OR2T2Q6IF00 324 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 PRSS57Q6UWY2 283 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 PLEKHG7Q6ZR37 379 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 OR5AS1Q8N127 324 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 OR51G2Q8NGK0 314 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 OR8J1Q8NGP2 316 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 YIPF5Q969M3 257 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 DCLRE1CQ96SD1 692 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 TBX5Q99593 518 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 RHNO1Q9BSD3 238 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 COPS4Q9BT78 406 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 PPP1R3EQ9H7J1 279 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 ELOVL3Q9HB03 270 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 DYNLRB1Q9NP97 96 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 SMPD3Q9NY59 655 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 EIF3KQ9UBQ5 218 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 ENOPH1Q9UHY7 261 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 PURGQ9UJV8 347 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 LRP12Q9Y561 859 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 N6AMT1Q9Y5N5 214 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 GMPPBQ9Y5P6 360 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 PMF1-BGLAPU3KQ54 211 aa8.04□□□□□ -1.12
NPLOC4-219ENST00000576713 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 H0YL77 283 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 H7C1Q1 480 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 J3QRE1 110 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 MLNRO43193 412 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 SRSF10O75494 262 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 PNPP00491 289 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 IGHV1-46P01743 117 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 LCATP04180 440 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 LYNP07948 512 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 KITLGP21583 273 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 COL8A2P25067 703 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 CX3CR1P49238 355 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF121P58317 390 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 CDC42P60953 191 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 SNRPGP62308 76 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 ADARB1P78563 741 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 CCL8P80075 99 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 KRTAP1-1Q07627 177 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 MFGE8Q08431 387 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 ECH1Q13011 328 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 TSTQ16762 297 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 ZNF718Q3SXZ3 478 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 SHEQ5VZ18 495 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 LAIR2Q6ISS4 152 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 DRAM2Q6UX65 266 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 FBXW12Q6X9E4 464 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 SLC35F2Q8IXU6 374 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 BHLHE23Q8NDY6 225 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 RHOXF1Q8NHV9 184 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 CHAC2Q8WUX2 184 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 SPTSSAQ969W0 71 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 APOBEC3DQ96AK3 386 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 HAVCR1Q96D42 359 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 TRMT61AQ96FX7 289 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 LYZL4Q96KX0 146 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 CNN2Q99439 309 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 APOL4Q9BPW4 351 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 TEX12Q9BXU0 123 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 PRRG3Q9BZD7 231 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 YIPF3Q9GZM5 350 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 DCLRE1BQ9H816 532 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 AMBNQ9NP70 447 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 DCAF16Q9NXF7 216 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 HAO2Q9NYQ3 351 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 ORC6Q9Y5N6 252 aa8.03□□□□□ -1.12
NPLOC4-219ENST00000576713 A0A1W2PQL4 384 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 WNT9BO14905 357 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 SPRY3O43610 288 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 RP2O75695 350 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 H2BFMP0C1H6 154 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 DAOP14920 347 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 SELEP16581 610 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 GCH1P30793 250 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 SLC6A9P48067 706 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 RGS6P49758 472 aa8.02□□□□□ -1.13
NPLOC4-219ENST00000576713 TPTEP56180 551 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms