RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 HNRNPA3P51991 378 aaKnown RBP4.05□□□□□ -1.76
TSR1-203ENST00000575049 CLDN6P56747 220 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 VLDLRP98155 873 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 IFITM2Q01629 132 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 GNA12Q03113 381 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 TCP10Q12799 353 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 FASTKQ14296 549 aaKnown RBP4.05□□□□□ -1.76
TSR1-203ENST00000575049 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 C5orf64Q2M2E5 130 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 GOLGA7BQ2TAP0 167 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 XAF1Q6GPH4 301 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 LCLAT1Q6UWP7 414 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 SMIM5Q71RC9 77 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 CHMP1BQ7LBR1 199 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 TMEM25Q86YD3 366 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 CPNE9Q8IYJ1 553 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 PRSS33Q8NF86 280 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 TTLQ8NG68 377 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR6Q1Q8NGQ2 317 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR2Y1Q8NGV0 311 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR6K2Q8NGY2 324 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR51F2Q8NH61 342 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 ITFG1Q8TB96 612 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 SPPL2BQ8TCT7 592 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR8D1Q8WZ84 308 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 PPWD1Q96BP3 646 aaKnown RBP4.05□□□□□ -1.76
TSR1-203ENST00000575049 OR8B4Q96RC9 309 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 TAAR1Q96RJ0 339 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 GPR22Q99680 433 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 APOL2Q9BQE5 337 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 ELOVL4Q9GZR5 314 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 NXF3Q9H4D5 531 aaKnown RBP4.05□□□□□ -1.76
TSR1-203ENST00000575049 EML4Q9HC35 981 aaKnown RBP4.05□□□□□ -1.76
TSR1-203ENST00000575049 SLC39A1Q9NY26 324 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 NDUFAF1Q9Y375 327 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 UGT2A1Q9Y4X1 527 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 SIPA1L1O43166 1804 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 SLX4Q8IY92 1834 aa4.05□□□□□ -1.76
TSR1-203ENST00000575049 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 CKAP5Q14008 2032 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 MN1Q10571 1320 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 COL16A1Q07092 1604 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 M0QYV0 167 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 DCTN6O00399 190 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 UBDO15205 165 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 MRPS12O15235 138 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 MPDU1O75352 247 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 SUPT7LO94864 414 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 FGF1P05230 155 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 RHOCP08134 193 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 GFAPP14136 432 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 CD1DP15813 335 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 CRHBPP24387 322 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 PSMB5P28074 263 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 SDC4P31431 198 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ACTR1BP42025 376 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 RBM34P42696 430 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 MAGEA2P43356 314 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 DNASE1L1P49184 302 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 GDI2P50395 445 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 PDLIM4P50479 330 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 IFITM3Q01628 133 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 CD300CQ08708 224 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 AQP6Q13520 282 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 TPBGQ13641 420 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 PAFAH1B3Q15102 231 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 MLF2Q15773 248 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 NEDD8Q15843 81 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 FAM189A2Q15884 450 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ACER2Q5QJU3 275 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 CLVS2Q5SYC1 327 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 NCBP2-AS2Q69YL0 99 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 FAM183BPQ6ZVS7 135 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 BHLHA9Q7RTU4 235 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 C16orf82Q7Z2V1 217 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 PTAR1Q7Z6K3 402 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 STX12Q86Y82 276 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 KLHDC8BQ8IXV7 354 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 EID2Q8N6I1 236 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 SAMD12Q8N8I0 201 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 SUMF1Q8NBK3 374 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 MDS2Q8NDY4 140 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ZNF738Q8NE65 137 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 PHF10Q8WUB8 498 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 CYGBQ8WWM9 190 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 RASSF5Q8WWW0 418 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 AURKBQ96GD4 344 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 ZNF486Q96H40 463 aaPredicted RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 ITCHQ96J02 903 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 ADGRG7Q96K78 797 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 B3GALT6Q96L58 329 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 HSFY1Q96LI6 401 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 MRPL57Q9BQC6 102 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 MMP28Q9H239 520 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 DHX35Q9H5Z1 703 aaKnown RBP4.04□□□□□ -1.76
TSR1-203ENST00000575049 CAB39LQ9H9S4 337 aa4.04□□□□□ -1.76
TSR1-203ENST00000575049 PLEKHA1Q9HB21 404 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms