RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 RAB27BO00194 218 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 CYB5AP00167 134 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 APOC1P02654 83 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-208ENST00000574755 QRFPP83859 136 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 BCL2A1Q16548 175 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-208ENST00000574755 Q6ZTK2 550 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 RNF144BQ7Z419 303 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 CHST4Q8NCG5 386 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 SLA2Q9H6Q3 261 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF69Q9UC07 566 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
VPS33B-208ENST00000574755 RTTNQ86VV8 2226 aa12.34□□□□□ -0.43
VPS33B-208ENST00000574755 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CREBL2O60519 120 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CYTIPO60759 359 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CELA3AP09093 270 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 B4GALT1P15291 398 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 SRYQ05066 204 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 GLIPR1L1Q6UWM5 242 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CPT1CQ8TCG5 803 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CMBLQ96DG6 245 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 IP6K3Q96PC2 410 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 GPER1Q99527 375 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 RANBP3Q9H6Z4 567 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 GPN1Q9HCN4 374 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 HSPB11Q9Y547 144 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 MED13Q9UHV7 2174 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 FAM166BA8MTA8 275 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 SGCEO43556 437 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 DHRS3O75911 302 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 RAB3DO95716 219 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 IGLV3-1P01715 115 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 RLN1P04808 185 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 OR3A4PP47883 348 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 MECP2P51608 486 aaKnown RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 ZP1P60852 638 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
VPS33B-208ENST00000574755 DMRTC1Q5HYR2 192 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM53Q6P2H8 277 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CHMP1BQ7LBR1 199 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM229BQ8NBD8 167 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 FER1L6-AS2Q96M78 137 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 TTTY12Q9BZ98 90 aa12.33□□□□□ -0.44
VPS33B-208ENST00000574755 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 SCGNO76038 276 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 HPNP05981 417 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 MAGEA5P43359 124 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 RAB35Q15286 201 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 NDUFA5Q16718 116 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 AQP3Q92482 292 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 MED30Q96HR3 178 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 FOXB1Q99853 325 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 KLK13Q9UKR3 277 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 IGKV1-9A0A0C4DH69 117 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 WIPF3A6NGB9 483 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 CST2P09228 141 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 CDNFQ49AH0 187 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF626Q68DY1 528 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 LAMTOR1Q6IAA8 161 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 CDH26Q8IXH8 852 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 SUMF1Q8NBK3 374 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF431Q8TF32 576 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-208ENST00000574755 NPRL2Q8WTW4 380 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-208ENST00000574755 FBLN5Q9UBX5 448 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 MGAT4AQ9UM21 535 aa12.32□□□□□ -0.44
VPS33B-208ENST00000574755 ZNF736B4DX44 427 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-208ENST00000574755 M0QYG6 137 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 AKR7A2O43488 359 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 MTRF1O75570 445 aaKnown RBP12.31□□□□□ -0.44
VPS33B-208ENST00000574755 IL5P05113 134 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 CPN1P15169 458 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 FAHP16930 419 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 LHX2P50458 406 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 SCRN3Q0VDG4 424 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 ECH1Q13011 328 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
VPS33B-208ENST00000574755 RIPPLY2Q5TAB7 128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms