RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 OR8J3Q8NGG0 315 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 CFHR4Q92496 578 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 SLC22A4Q9H015 551 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 NRIP3Q9NQ35 241 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 ADA2Q9NZK5 511 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 GMDSO60547 372 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 ZNF92Q03936 586 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 PCK2Q16822 640 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 WDR38Q5JTN6 314 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 C11orf87Q6NUJ2 197 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 DNM1P34Q6PK57 102 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 RRM2BQ7LG56 351 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 Q8N7P7 452 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 LY6G5BQ8NDX9 201 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 PHF21AQ96BD5 680 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 KAAG1Q9UBP8 84 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 SIGLEC7Q9Y286 467 aa14.34□□□□□ -0.11
CCDC40-211ENST00000574099 NOTCH3Q9UM47 2321 aa14.33□□□□□ -0.11
CCDC40-211ENST00000574099 IGLV1-36A0A0B4J1U3 117 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 FAM220BPB1ANY3 271 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 PPP1R3DO95685 299 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 CRABP1P29762 137 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 IKZF1Q13422 519 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 C11orf91Q3C1V1 193 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 TEX36Q5VZQ5 186 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 SPERTQ8NA61 448 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 PLPP7Q8NBV4 271 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 SLC26A10Q8NG04 563 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 OR2T6Q8NHC8 308 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 LRRC29Q8WV35 223 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 DYDC1Q8WWB3 177 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 H1FXQ92522 213 aaKnown RBP14.33□□□□□ -0.12
CCDC40-211ENST00000574099 SEH1LQ96EE3 360 aa14.33□□□□□ -0.12
CCDC40-211ENST00000574099 GPX7Q96SL4 187 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-211ENST00000574099 SRA1Q9HD15 236 aaKnown RBP14.33□□□□□ -0.12
CCDC40-211ENST00000574099 PNRC2Q9NPJ4 139 aaKnown RBP14.33□□□□□ -0.12
CCDC40-211ENST00000574099 M0R135 149 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 XPNPEP2O43895 674 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 ZNF682O95780 498 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 MPIG6BO95866 241 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 SELLP14151 372 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 TPTEP56180 551 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 FXYD6P3P58550 94 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 ECH1Q13011 328 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 MICBQ29980 383 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 GLYATL3Q5SZD4 288 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 ZBTB37Q5TC79 503 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 OR6V1Q8N148 313 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 OR2T12Q8NG77 320 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 OR56B2PQ8NGI1 322 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 OR2AJ1Q8NGZ0 328 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 RORBQ92753 470 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 ZNF799Q96GE5 643 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 RSRC1Q96IZ7 334 aaKnown RBP14.32□□□□□ -0.12
CCDC40-211ENST00000574099 CLPTM1LQ96KA5 538 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 SSX3Q99909 188 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 TMEM120AQ9BXJ8 343 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 MMP28Q9H239 520 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 B9D1Q9UPM9 204 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 TMEM5Q9Y2B1 443 aa14.32□□□□□ -0.12
CCDC40-211ENST00000574099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-211ENST00000574099 ACOT8O14734 319 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 MRASO14807 208 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 PTP4A3O75365 173 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 LHBP01229 141 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 HLA-DQA2P01906 255 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 PAX6P26367 422 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 KIR2DS4P43632 304 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 RPS6KA3P51812 740 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 RFX4Q33E94 735 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 C11orf88Q6PI97 169 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 TSEN54Q7Z6J9 526 aaKnown RBP14.31□□□□□ -0.12
CCDC40-211ENST00000574099 OR4S1Q8NGB4 309 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 TNFRSF14Q92956 283 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 FN3KQ9H479 309 aa14.31□□□□□ -0.12
CCDC40-211ENST00000574099 MRPL15Q9P015 296 aaKnown RBP14.31□□□□□ -0.12
CCDC40-211ENST00000574099 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
CCDC40-211ENST00000574099 PRPF19Q9UMS4 504 aaKnown RBP14.31□□□□□ -0.12
CCDC40-211ENST00000574099 BHLHE40O14503 412 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 NDUFB3O43676 98 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 FBXO24O75426 580 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 GMFBP60983 142 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 CSNK2BP67870 215 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 DPY19L2P2Q6ZN68 376 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 SLC36A1Q7Z2H8 476 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 WDR86Q86TI4 376 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 BEND2Q8NDZ0 799 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 OR51G2Q8NGK0 314 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 SLC7A13Q8TCU3 470 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 R3HDM4Q96D70 268 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 MAP6Q96JE9 813 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 ERMAPQ96PL5 475 aaPredicted RBP14.3□□□□□ -0.12
CCDC40-211ENST00000574099 NMNAT3Q96T66 252 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 DCTN5Q9BTE1 182 aa14.3□□□□□ -0.12
CCDC40-211ENST00000574099 NSRP1Q9H0G5 558 aaKnown RBP14.3□□□□□ -0.12
CCDC40-211ENST00000574099 RPRD1BQ9NQG5 326 aaKnown RBP14.3□□□□□ -0.12
CCDC40-211ENST00000574099 C14orf119Q9NWQ9 140 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms