RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 FAM3AP98173 230 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 TNK1Q13470 666 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 TIGD6Q17RP2 521 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 NKPD1Q17RQ9 610 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 WDR38Q5JTN6 314 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 FDX2Q6P4F2 183 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 Q6ZR03 302 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 PGAP1Q75T13 922 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 MRPL21Q7Z2W9 205 aaKnown RBP18.83■□□□□ 0.6
RAB40B-207ENST00000572603 PRSS35Q8N3Z0 413 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 ZNF485Q8NCK3 441 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 SORCS2Q96PQ0 1159 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 RGCCQ9H4X1 137 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 OPA3Q9H6K4 179 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 DYNLRB1Q9NP97 96 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 SLC22A13Q9Y226 551 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 SNX5Q9Y5X3 404 aa18.83■□□□□ 0.6
RAB40B-207ENST00000572603 TIMM8AO60220 97 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-207ENST00000572603 NDUFS7O75251 213 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 MYL12AP19105 171 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 PTH2RP49190 550 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 NANOS3P60323 173 aaKnown RBP18.82■□□□□ 0.6
RAB40B-207ENST00000572603 DOC2BQ14184 412 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 GFOD2Q3B7J2 385 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 BCL2L15Q5TBC7 163 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 OR2G6Q5TZ20 316 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 EGFL6Q8IUX8 553 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 ELMOD2Q8IZ81 293 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 OR5AS1Q8N127 324 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 ZCCHC24Q8N2G6 241 aaKnown RBP18.82■□□□□ 0.6
RAB40B-207ENST00000572603 ZNF786Q8N393 782 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 STX19Q8N4C7 294 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 MRPL48Q96GC5 212 aaKnown RBP18.82■□□□□ 0.6
RAB40B-207ENST00000572603 GSX2Q9BZM3 304 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 SCN3BQ9NY72 215 aa18.82■□□□□ 0.6
RAB40B-207ENST00000572603 CAB39Q9Y376 341 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-207ENST00000572603 TANC2Q9HCD6 1990 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 E9PI62 339 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 TACSTD2P09758 323 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 NAT2P11245 290 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 OR8B8Q15620 311 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 RBM48Q5RL73 367 aaKnown RBP18.81■□□□□ 0.6
RAB40B-207ENST00000572603 OR56B2PQ8NGI1 322 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 OR2G2Q8NGZ5 317 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 OR52N1Q8NH53 320 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 SPRYD4Q8WW59 207 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-207ENST00000572603 TPK1Q9H3S4 243 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 ERVK-18Q9QC07 812 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 CGGBP1Q9UFW8 167 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-207ENST00000572603 FBXO9Q9UK97 447 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-207ENST00000572603 GTF2A1LQ9UNN4 478 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 TPRKBQ9Y3C4 175 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 PMF1-BGLAPU3KQ54 211 aa18.81■□□□□ 0.6
RAB40B-207ENST00000572603 A0A1B0GTI1 187 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 A0A1B0GWJ7 208 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 CD300LBA8K4G0 201 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 C17orf100A8MU93 164 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 PTGES3LE9PB15 166 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 IGHV4-39P01824 125 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 HTR1AP08908 422 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 BMP4P12644 408 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 SELEP16581 610 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 IRF3Q14653 427 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 RNLSQ5VYX0 342 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 KLHL36Q8N4N3 616 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 BHLHE23Q8NDY6 225 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 OR8G5Q8NG78 346 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 OR51E1Q8TCB6 317 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 MYCBPQ99417 103 aaPredicted RBP18.8■□□□□ 0.6
RAB40B-207ENST00000572603 MSL2Q9HCI7 577 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 GPR84Q9NQS5 396 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 ZNF391Q9UJN7 358 aa18.8■□□□□ 0.6
RAB40B-207ENST00000572603 LALBAP00709 142 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 MT-ND5P03915 603 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 ADH4P08319 380 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 CCL1P22362 96 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 CFL1P23528 166 aaKnown RBP18.79■□□□□ 0.6
RAB40B-207ENST00000572603 ACKR3P25106 362 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 GSK3AP49840 483 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 ZNF81P51508 661 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 MED21Q13503 144 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 MOGQ16653 247 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 XAF1Q6GPH4 301 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 LRRC75A-AS1Q8N1F1 130 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 PLPP7Q8NBV4 271 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 RPS4Y2Q8TD47 263 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 MYDGFQ969H8 173 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 PERPQ96FX8 193 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 SLC30A2Q9BRI3 323 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 CDCA4Q9BXL8 241 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 CYSLTR2Q9NS75 346 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 FRRS1LQ9P0K9 344 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 GPR160Q9UJ42 338 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 LRRC42Q9Y546 428 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 VPS13CQ709C8 3753 aa18.79■□□□□ 0.6
RAB40B-207ENST00000572603 MAST4O15021 2626 aa18.78■□□□□ 0.6
RAB40B-207ENST00000572603 GGT3PA6NGU5 568 aa18.78■□□□□ 0.6
RAB40B-207ENST00000572603 P2RY10O00398 339 aa18.78■□□□□ 0.6
RAB40B-207ENST00000572603 MLNRO43193 412 aa18.78■□□□□ 0.6
RAB40B-207ENST00000572603 NCR1O76036 304 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms