RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 NSL1Q96IY1 281 aa15.05■□□□□ -0
CHD3-214ENST00000572579 CLPTM1LQ96KA5 538 aa15.05■□□□□ -0
CHD3-214ENST00000572579 OR8B2Q96RD0 313 aa15.05■□□□□ -0
CHD3-214ENST00000572579 CCT8L2Q96SF2 557 aa15.05■□□□□ -0
CHD3-214ENST00000572579 KCNJ15Q99712 375 aa15.05■□□□□ -0
CHD3-214ENST00000572579 COPS4Q9BT78 406 aa15.05■□□□□ -0
CHD3-214ENST00000572579 ZNF747Q9BV97 191 aa15.05■□□□□ -0
CHD3-214ENST00000572579 RASSF4Q9H2L5 321 aa15.05■□□□□ -0
CHD3-214ENST00000572579 MAGIXQ9H6Y5 334 aa15.05■□□□□ -0
CHD3-214ENST00000572579 SMURF1Q9HCE7 757 aa15.05■□□□□ -0
CHD3-214ENST00000572579 CENPMQ9NSP4 180 aa15.05■□□□□ -0
CHD3-214ENST00000572579 NDE1Q9NXR1 346 aa15.05■□□□□ -0
CHD3-214ENST00000572579 N6AMT1Q9Y5N5 214 aa15.05■□□□□ -0
CHD3-214ENST00000572579 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
CHD3-214ENST00000572579 DHRS12A0PJE2 317 aa15.04■□□□□ -0
CHD3-214ENST00000572579 GMDSO60547 372 aa15.04■□□□□ -0
CHD3-214ENST00000572579 LHBP01229 141 aa15.04■□□□□ -0
CHD3-214ENST00000572579 RNASE1P07998 156 aaKnown RBP15.04■□□□□ -0
CHD3-214ENST00000572579 FMO3P31513 532 aa15.04■□□□□ -0
CHD3-214ENST00000572579 FGF12P61328 243 aa15.04■□□□□ -0
CHD3-214ENST00000572579 POU4F2Q12837 409 aa15.04■□□□□ -0
CHD3-214ENST00000572579 TRIM25Q14258 630 aaKnown RBP15.04■□□□□ -0
CHD3-214ENST00000572579 KLHL12Q53G59 568 aa15.04■□□□□ -0
CHD3-214ENST00000572579 BRD3OSQ6XYD6 125 aa15.04■□□□□ -0
CHD3-214ENST00000572579 IQCF1Q8N6M8 205 aa15.04■□□□□ -0
CHD3-214ENST00000572579 OR56B2PQ8NGI1 322 aa15.04■□□□□ -0
CHD3-214ENST00000572579 ADAT1Q9BUB4 502 aaKnown RBP15.04■□□□□ -0
CHD3-214ENST00000572579 MS4A7Q9GZW8 240 aaPredicted RBP15.04■□□□□ -0
CHD3-214ENST00000572579 MRPL15Q9P015 296 aaKnown RBP15.04■□□□□ -0
CHD3-214ENST00000572579 RNF7Q9UBF6 113 aa15.04■□□□□ -0
CHD3-214ENST00000572579 CLN8Q9UBY8 286 aa15.04■□□□□ -0
CHD3-214ENST00000572579 SAMHD1Q9Y3Z3 626 aaKnown RBP15.04■□□□□ -0
CHD3-214ENST00000572579 TRAV40A0A0B4J280 105 aa15.03■□□□□ -0
CHD3-214ENST00000572579 GGT3PA6NGU5 568 aa15.03■□□□□ -0
CHD3-214ENST00000572579 FAM183AA6NL82 134 aa15.03■□□□□ -0
CHD3-214ENST00000572579 CLDN34H7C241 214 aa15.03■□□□□ -0
CHD3-214ENST00000572579 LGALS8O00214 317 aa15.03■□□□□ -0
CHD3-214ENST00000572579 ACOT8O14734 319 aa15.03■□□□□ -0
CHD3-214ENST00000572579 SPRY1O43609 319 aaPredicted RBP15.03■□□□□ -0
CHD3-214ENST00000572579 SFTPBP07988 381 aa15.03■□□□□ -0
CHD3-214ENST00000572579 MMP9P14780 707 aa15.03■□□□□ -0
CHD3-214ENST00000572579 FAM3AP98173 230 aa15.03■□□□□ -0
CHD3-214ENST00000572579 DEFB112Q30KQ8 113 aa15.03■□□□□ -0
CHD3-214ENST00000572579 BTNL3Q6UXE8 466 aa15.03■□□□□ -0
CHD3-214ENST00000572579 CD300LDQ6UXZ3 194 aa15.03■□□□□ -0
CHD3-214ENST00000572579 RBMS3Q6XE24 437 aaKnown RBP15.03■□□□□ -0
CHD3-214ENST00000572579 DHFR2Q86XF0 187 aa15.03■□□□□ -0
CHD3-214ENST00000572579 FGFRL1Q8N441 504 aa15.03■□□□□ -0
CHD3-214ENST00000572579 GCSAMQ8N6F7 178 aa15.03■□□□□ -0
CHD3-214ENST00000572579 BOLLQ8N9W6 283 aaKnown RBP15.03■□□□□ -0
CHD3-214ENST00000572579 PLPP7Q8NBV4 271 aa15.03■□□□□ -0
CHD3-214ENST00000572579 OR2T33Q8NG76 320 aa15.03■□□□□ -0
CHD3-214ENST00000572579 OR11L1Q8NGX0 322 aa15.03■□□□□ -0
CHD3-214ENST00000572579 PLEKHA8Q96JA3 519 aa15.03■□□□□ -0
CHD3-214ENST00000572579 FEVQ99581 238 aa15.03■□□□□ -0
CHD3-214ENST00000572579 PRDM13Q9H4Q3 707 aa15.03■□□□□ -0
CHD3-214ENST00000572579 FN3KRPQ9HA64 309 aa15.03■□□□□ -0
CHD3-214ENST00000572579 C1orf123Q9NWV4 160 aa15.03■□□□□ -0
CHD3-214ENST00000572579 A0A1B0GW55 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 PHYHO14832 338 aa15.02■□□□□ -0
CHD3-214ENST00000572579 TMPRSS2O15393 492 aa15.02■□□□□ -0
CHD3-214ENST00000572579 GRPP07492 148 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L2P0CJ85 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L3P0CJ86 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L4P0CJ87 422 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L5P0CJ88 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L6P0CJ89 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L7P0CJ90 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 IRF2P14316 349 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4L9Q6RFH8 374 aaPredicted RBP15.02■□□□□ -0
CHD3-214ENST00000572579 NLRC3Q7RTR2 1065 aa15.02■□□□□ -0
CHD3-214ENST00000572579 FAM90A1Q86YD7 464 aa15.02■□□□□ -0
CHD3-214ENST00000572579 ADGRG5Q8IZF4 528 aa15.02■□□□□ -0
CHD3-214ENST00000572579 OR10G2Q8NGC3 310 aa15.02■□□□□ -0
CHD3-214ENST00000572579 OR6K6Q8NGW6 343 aa15.02■□□□□ -0
CHD3-214ENST00000572579 SGMS2Q8NHU3 365 aa15.02■□□□□ -0
CHD3-214ENST00000572579 TBX15Q96SF7 602 aa15.02■□□□□ -0
CHD3-214ENST00000572579 SLC22A4Q9H015 551 aa15.02■□□□□ -0
CHD3-214ENST00000572579 CMC2Q9NRP2 79 aa15.02■□□□□ -0
CHD3-214ENST00000572579 DUX4Q9UBX2 424 aa15.02■□□□□ -0
CHD3-214ENST00000572579 BAIAP2Q9UQB8 552 aa15.02■□□□□ -0
CHD3-214ENST00000572579 GYPAP02724 150 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 FOXL1Q12952 345 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 RUSC1-AS1Q66K80 236 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 SLC16A9Q7RTY1 509 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 DPY19L4Q7Z388 723 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 TIGD4Q8IY51 512 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 RNF133Q8WVZ7 376 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 SEH1LQ96EE3 360 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 ABHD6Q9BV23 337 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 CHID1Q9BWS9 393 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 FGF23Q9GZV9 251 aaPredicted RBP15.01□□□□□ -0.01
CHD3-214ENST00000572579 REEP1Q9H902 201 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 MARCH7Q9H992 704 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 TAS2R1Q9NYW7 299 aa15.01□□□□□ -0.01
CHD3-214ENST00000572579 IGHV3OR15-7A0A075B7D8 119 aa15□□□□□ -0.01
CHD3-214ENST00000572579 ZNF878C9JN71 531 aa15□□□□□ -0.01
CHD3-214ENST00000572579 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15□□□□□ -0.01
CHD3-214ENST00000572579 AMY2BP19961 511 aa15□□□□□ -0.01
CHD3-214ENST00000572579 CFHR2P36980 270 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms