RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ZNF181Q2M3W8 571 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 GFOD2Q3B7J2 385 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 ZNF826PQ6ZT77 177 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 SPATA24Q86W54 205 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 OR8B3Q8NGG8 313 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 ZFAND2BQ8WV99 257 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 GCDHQ92947 438 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-204ENST00000571554 POP5Q969H6 163 aaKnown RBP11.49□□□□□ -0.57
RAB40B-204ENST00000571554 ZMYND19Q96E35 227 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-204ENST00000571554 NEIL1Q96FI4 390 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-204ENST00000571554 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 INTS14Q96SY0 518 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 MMADHCQ9H3L0 296 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-204ENST00000571554 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
RAB40B-204ENST00000571554 IGHV2-70DA0A0C4DH43 119 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 A6NLC8 198 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 E2F6O75461 281 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 PRKACGP22612 351 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 CFPP27918 469 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 GSTT1P30711 240 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 GRK5P34947 590 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 PAX2Q02962 417 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 GINS1Q14691 196 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 PLBD1Q6P4A8 553 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 FAM57BQ71RH2 274 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 Q8TCH9 128 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
RAB40B-204ENST00000571554 ABHD6Q9BV23 337 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 C1orf21Q9H246 121 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 PPP1R3EQ9H7J1 279 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 FN3KRPQ9HA64 309 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
RAB40B-204ENST00000571554 hCG_1807616A0A1W2PRN6 198 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 DYNC1I1O14576 645 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 GYG2O15488 501 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 SELENOFO60613 162 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 GLCEO94923 617 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
RAB40B-204ENST00000571554 UBA52P62987 128 aaKnown RBP11.47□□□□□ -0.57
RAB40B-204ENST00000571554 GRB2P62993 217 aaKnown RBP11.47□□□□□ -0.57
RAB40B-204ENST00000571554 PAX8Q06710 450 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 POU4F2Q12837 409 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 FLOT2Q14254 428 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 OR8B8Q15620 311 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 KLHL12Q53G59 568 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 TMEM236Q5W0B7 351 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 SLC16A9Q7RTY1 509 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 PARP8Q8N3A8 854 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 REEP6Q96HR9 211 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 TECTBQ96PL2 329 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 NUDT16L1Q9BRJ7 211 aaKnown RBP11.47□□□□□ -0.57
RAB40B-204ENST00000571554 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
RAB40B-204ENST00000571554 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 CTSZQ9UBR2 303 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 CLN8Q9UBY8 286 aa11.47□□□□□ -0.57
RAB40B-204ENST00000571554 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 TRAV40A0A0B4J280 105 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 AQP12BA6NM10 295 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 C22orf46C9J442 243 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 PRR23D1E9PI22 279 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 XRCC2O43543 280 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 GMDSO60547 372 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 PRR23D2P0DMB1 279 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 EGR1P18146 543 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 NAA10P41227 235 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 SLC15A1P46059 708 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 CBX1P83916 185 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 FAM3AP98173 230 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 RBMS3Q6XE24 437 aaKnown RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 ZNF841Q6ZN19 808 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 DCDC5Q6ZRR9 648 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 AQP12AQ8IXF9 295 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 TIGD4Q8IY51 512 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 BBS1Q8NFJ9 593 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 BCAS4Q8TDM0 211 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 TAF15Q92804 592 aaKnown RBP eCLIP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 ERGIC1Q969X5 290 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 SGK3Q96BR1 496 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 MS4A7Q9GZW8 240 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 SLC22A4Q9H015 551 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 RASSF4Q9H2L5 321 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms