RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SAR1AQ9NR31 198 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 GSN-AS1Q9NRJ2 163 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 SLC7A10Q9NS82 523 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 ZNF226Q9NYT6 803 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 SLC25A37Q9NYZ2 338 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 SLC9A8Q9Y2E8 581 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 TMED7Q9Y3B3 224 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 HDGFL3Q9Y3E1 203 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 WIPI2Q9Y4P8 454 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 MYO7BQ6PIF6 2116 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 CRYBG3Q68DQ2 2970 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 NINQ8N4C6 2090 aa3.26□□□□□ -1.89
NUP88-202ENST00000570937 GTF3C1Q12789 2109 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 LRRK2Q5S007 2527 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 AGRNO00468 2067 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 TRAV24A0A0B4J272 114 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR6C65A6NJZ3 312 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CLDN24A6NM45 220 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 C17orf51A8MQB3 221 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 ZNF724A8MTY0 619 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 B4DXG7 233 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 H0YC42 278 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 AIM2O14862 343 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 EFNA2O43921 213 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CYTIPO60759 359 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 FMO6PO60774 539 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 SS18L1O75177 396 aaPredicted RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 MRPL33O75394 65 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 TNFSF13O75888 250 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 DCTN3O75935 186 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 AQP8O94778 261 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 VAMP5O95183 116 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 AHSA1O95433 338 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 GKN3PP0CG01 181 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 POU2F1P14859 743 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CCNA2P20248 432 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 PAX7P23759 505 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 AQP1P29972 269 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 AGTR1P30556 359 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 UGT2B10P36537 528 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CD79BP40259 229 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CAPZA2P47755 286 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR3A2P47893 321 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR2B6P58173 313 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 GNGT1P63211 74 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 TGFBR3Q03167 851 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 TLE4Q04727 773 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 RASGEF1BQ0VAM2 473 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 FUT5Q11128 374 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
NUP88-202ENST00000570937 ZNF239Q16600 458 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 EXOC3L2Q2M3D2 409 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 C1QTNF12Q5T7M4 302 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 FAM91A1Q658Y4 838 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 NANOGP8Q6NSW7 305 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 DHRS4L2Q6PKH6 230 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 ZBTB49Q6ZSB9 765 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OLIG3Q7RTU3 272 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 HMGN2P46Q86SG4 172 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 P2RY8Q86VZ1 359 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 SNX32Q86XE0 403 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 VRK2Q86Y07 508 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 MSRB3Q8IXL7 192 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 UBE2J2Q8N2K1 259 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 Q8N377 158 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 LSMEM1Q8N8F7 131 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 ACBD4Q8NC06 268 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 STEAP2Q8NFT2 490 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR5T2Q8NGG2 359 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR10A6Q8NH74 314 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 PIGXQ8TBF5 258 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 ROBO4Q8WZ75 1007 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 APH1AQ96BI3 265 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 STARD4Q96DR4 205 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 MED18Q9BUE0 208 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 OR10A4Q9H209 315 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 NANOGQ9H9S0 305 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 C12orf10Q9HB07 376 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 DNAJC4Q9NNZ3 241 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 CTPS2Q9NRF8 586 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 C6orf203Q9P0P8 240 aaPredicted RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 ARL2BPQ9Y2Y0 163 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 NOSIPQ9Y314 301 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 FLNBO75369 2602 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 UTP20O75691 2785 aaKnown RBP3.25□□□□□ -1.89
NUP88-202ENST00000570937 CELSR2Q9HCU4 2923 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 DOPEY1Q5JWR5 2465 aa3.25□□□□□ -1.89
NUP88-202ENST00000570937 HIVEP3Q5T1R4 2406 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 USP9YO00507 2555 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 USP9XQ93008 2570 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 EXPH5Q8NEV8 1989 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 TMEM72A0PK05 275 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 HTR3EA5X5Y0 456 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C19orf84I3L1E1 186 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 M0QX08 132 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms