RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TEAD3Q99594 435 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 MDFIQ99750 246 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 CIB1Q99828 191 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 ADAT1Q9BUB4 502 aaKnown RBP10.96□□□□□ -0.65
CNOT1-220ENST00000569916 SLC22A4Q9H015 551 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 MRPL15Q9P015 296 aaKnown RBP10.96□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF319Q9P2F9 582 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 OAZ3Q9UMX2 235 aa10.96□□□□□ -0.65
CNOT1-220ENST00000569916 hCG_38984A0A1B0GV85 526 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 SAC3D1A6NKF1 404 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 F5H0A9 414 aaPredicted RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 H3BNX3 289 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 CYB5R3P00387 301 aaPredicted RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 MRPL3P09001 348 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 THBS2P35442 1172 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 MDH2P40926 338 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 HCCSP53701 268 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 PSMA6P60900 246 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 FAM3AP98173 230 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 KPNB1Q14974 876 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 OR8G1Q15617 311 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 TIGD6Q17RP2 521 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 LCN1P1Q5VSP4 162 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 BCDIN3DQ7Z5W3 292 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 LRRC28Q86X40 367 aaPredicted RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 SPICQ8N5J4 248 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 TCEANCQ8N8B7 351 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 OR52H1Q8NGJ2 320 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 SGK3Q96BR1 496 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 REEP6Q96HR9 211 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 SP140LQ9H930 580 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 PATZ1Q9HBE1 687 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 BRD7Q9NPI1 651 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 ENOPH1Q9UHY7 261 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 LAMP5Q9UJQ1 280 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 NOP16Q9Y3C1 178 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 LRP12Q9Y561 859 aa10.95□□□□□ -0.66
CNOT1-220ENST00000569916 FBN1P35555 2871 aaKnown RBP10.95□□□□□ -0.66
CNOT1-220ENST00000569916 MXRA5Q9NR99 2828 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 ARHGAP32A7KAX9 2087 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PRR32B1ATL7 298 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 GMDSO60547 372 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PTBP3O95758 552 aaKnown RBP10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PNPP00491 289 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 POLR2IP36954 125 aaKnown RBP10.94□□□□□ -0.66
CNOT1-220ENST00000569916 SEC61A1P61619 476 aaKnown RBP10.94□□□□□ -0.66
CNOT1-220ENST00000569916 MPPED2Q15777 294 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 AADACL4Q5VUY2 407 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 NXNL2Q5VZ03 156 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.94□□□□□ -0.66
CNOT1-220ENST00000569916 MUC20Q8N307 709 aaPredicted RBP10.94□□□□□ -0.66
CNOT1-220ENST00000569916 KLHL36Q8N4N3 616 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 TMEM163Q8TC26 289 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 Q8TCH9 128 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 ERGIC1Q969X5 290 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PGAM5Q96HS1 289 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PKP2Q99959 881 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 OSBPL10Q9BXB5 764 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 GABARAPL3Q9BY60 117 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 OR10A2Q9H208 303 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 PCDHB10Q9UN67 800 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 DNHD1Q96M86 4753 aa10.94□□□□□ -0.66
CNOT1-220ENST00000569916 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 A0A0X1KG70 313 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 LRRC30A6NM36 301 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 CEACAM18A8MTB9 384 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 EBAG9O00559 213 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 FAM20BO75063 409 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 ZNF205O95201 554 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 FSTL3O95633 263 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 AVPP01185 164 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 CFL1P23528 166 aaKnown RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 ZFP36P26651 326 aaKnown RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 DDOSTP39656 456 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 LCN2P80188 198 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 GFOD2Q3B7J2 385 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 FAM201AQ5SY85 155 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 FAHD2BQ6P2I3 314 aaPredicted RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 C1orf229Q6ZS94 237 aaPredicted RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 MEPCEQ7L2J0 689 aaKnown RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 KRT77Q7Z794 578 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 KLBQ86Z14 1044 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 C1orf87Q8N0U7 546 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 RFLNBQ8N5W9 214 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 OR8B12Q8NGG6 310 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 FAHD2AQ96GK7 314 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 IL4I1Q96RQ9 567 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 CNN2Q99439 309 aaKnown RBP10.93□□□□□ -0.66
CNOT1-220ENST00000569916 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 RGCCQ9H4X1 137 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 NIPAL2Q9H841 368 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 TMEM165Q9HC07 324 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 UFSP2Q9NUQ7 469 aa10.93□□□□□ -0.66
CNOT1-220ENST00000569916 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
CNOT1-220ENST00000569916 SLC22A31A6NKX4 558 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms