RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ARMC1Q9NVT9 282 aa18.82■□□□□ 0.6
RBFOX1-219ENST00000569895 ERVK-18Q9QC07 812 aa18.82■□□□□ 0.6
RBFOX1-219ENST00000569895 PRPF19Q9UMS4 504 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-219ENST00000569895 N6AMT1Q9Y5N5 214 aa18.82■□□□□ 0.6
RBFOX1-219ENST00000569895 NDUFA2O43678 99 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 SOX14O95416 240 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 APOC1P02654 83 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 RAP2AP10114 183 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 MS4A2Q01362 244 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 AWAT1Q58HT5 328 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 CD276Q5ZPR3 534 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 WDR25Q64LD2 544 aaPredicted RBP18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 LYPD4Q6UWN0 246 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 CD300LDQ6UXZ3 194 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 BCL6BQ8N143 479 aaPredicted RBP18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 OR4Q3Q8NH05 313 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 TEX47Q8TBZ9 253 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 SLC25A28Q96A46 364 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 TOR3AQ9H497 397 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 C14orf119Q9NWQ9 140 aa18.81■□□□□ 0.6
RBFOX1-219ENST00000569895 TRAV38-1A0A0B4J264 116 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 LGALS8O00214 317 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 PTBP3O95758 552 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 HKR1P10072 659 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 OR8B8Q15620 311 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 C9orf139Q6ZV77 190 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 CCDC197Q8NCU1 140 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 OR10G2Q8NGC3 310 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 ASB9Q96DX5 294 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 MMADHCQ9H3L0 296 aaPredicted RBP18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 CMC2Q9NRP2 79 aa18.8■□□□□ 0.6
RBFOX1-219ENST00000569895 DNAJC9-AS1A6NH13 148 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 ANKRD30BLA7E2S9 258 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 H3BN98 237 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 TBX1O43435 398 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 ENSAO43768 121 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 LIPFP07098 398 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 SLC2A1P11166 492 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 HSD11B1P28845 292 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 PSMB10P40306 273 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 BPIFB3P59826 476 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 EIF2B1Q14232 305 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 LYPD2Q6UXB3 125 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 BOLLQ8N9W6 283 aaKnown RBP18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 OR56B2PQ8NGI1 322 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 GIPC3Q8TF64 312 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 SPSB4Q96A44 273 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 DACT3Q96B18 629 aaPredicted RBP18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 INTS14Q96SY0 518 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 VNN3Q9NY84 501 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 KIF17Q9P2E2 1029 aa18.79■□□□□ 0.6
RBFOX1-219ENST00000569895 DHRS12A0PJE2 317 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 A6NLC8 198 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CLDN34H7C241 214 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 FAM107AO95990 144 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CST1P01037 141 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 ANXA2P07355 339 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 GRPP07492 148 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 IGHV4-38-2P0DP08 117 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CLUP10909 449 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 PSKH1P11801 424 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 HOXB6P17509 224 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 PAICSP22234 425 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CFL1P23528 166 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 GRK5P34947 590 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CX3CR1P49238 355 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 TIGD6Q17RP2 521 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 SFRP4Q6FHJ7 346 aaPredicted RBP18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 ZNF841Q6ZN19 808 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 SPATC1Q76KD6 591 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 RHOUQ7L0Q8 258 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 SHFQ7M4L6 423 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 C19orf18Q8NEA5 215 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 OR8S1Q8NH09 359 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 OTULINQ96BN8 352 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 TECTBQ96PL2 329 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 DUX5Q96PT3 197 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 FEVQ99581 238 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 CHID1Q9BWS9 393 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 C1orf21Q9H246 121 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 C1orf123Q9NWV4 160 aa18.78■□□□□ 0.6
RBFOX1-219ENST00000569895 IGHV3OR16-10A0A075B7F0 116 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 ARRDC5A6NEK1 342 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 GNGT2O14610 69 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 PLATP00750 562 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 GSTT1P30711 240 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 DPY19L4Q7Z388 723 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 ERI1Q8IV48 349 aaKnown RBP18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 OR52H1Q8NGJ2 320 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 OR6N2Q8NGY6 317 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 ZNF48Q96MX3 618 aaPredicted RBP18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 NIPSNAP1Q9BPW8 284 aa18.77■□□□□ 0.6
RBFOX1-219ENST00000569895 TRAV40A0A0B4J280 105 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 hCG_1807616A0A1W2PRN6 198 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 C5orf63A6NC05 138 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 OOEPA6NGQ2 149 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 C3orf80F5H4A9 247 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 RNASE1P07998 156 aaKnown RBP18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 SNCBQ16143 134 aa18.76■□□□□ 0.59
RBFOX1-219ENST00000569895 LINC01590Q5TEZ4 76 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms