RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 BRD7Q9NPI1 651 aa11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 HAO2Q9NYQ3 351 aa11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 NPTNQ9Y639 398 aa11.67□□□□□ -0.54
HERPUD1-218ENST00000569569 FAM157AC9JC47 383 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 EI24O14681 340 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 GMDSO60547 372 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 ANPEPP15144 967 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CFL1P23528 166 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CDC42P60953 191 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 FAM3AP98173 230 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 MAB21L1Q13394 359 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CHRFAM7AQ494W8 412 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CELF2-AS1Q8N7Q2 184 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 OR8J1Q8NGP2 316 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 ASB17Q8WXJ9 295 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 REEP6Q96HR9 211 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 PGAM5Q96HS1 289 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CNN2Q99439 309 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 MNTQ99583 582 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 C9orf16Q9BUW7 83 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 MROQ9BYG7 248 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 DCAF16Q9NXF7 216 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF319Q9P2F9 582 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 LRP12Q9Y561 859 aa11.66□□□□□ -0.54
HERPUD1-218ENST00000569569 SVEP1Q4LDE5 3571 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ISPDA4D126 451 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 PHYHO14832 338 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF254O75437 659 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 IGHV2-70P01814 119 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 CA6P23280 308 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 CD200P41217 278 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 GATA4P43694 442 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 DVL1P1P54792 670 aaPredicted RBP11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 OR8G1Q15617 311 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF181Q2M3W8 571 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 KLBQ86Z14 1044 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF679Q8IYX0 411 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 PQLC1Q8N2U9 271 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 CBR4Q8N4T8 237 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 SPERTQ8NA61 448 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 OR56B2PQ8NGI1 322 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ZNF420Q8TAQ5 688 aaPredicted RBP11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 TRUB1Q8WWH5 349 aaKnown RBP11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ERGIC1Q969X5 290 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 HRASLS5Q96KN8 279 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 SIGLEC11Q96RL6 698 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 GAL3ST1Q99999 423 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 BEX2Q9BXY8 128 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 SHARPINQ9H0F6 387 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 ADGRL4Q9HBW9 690 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 WARS2Q9UGM6 360 aaKnown RBP11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 COPS3Q9UNS2 423 aa11.65□□□□□ -0.54
HERPUD1-218ENST00000569569 hCG_38984A0A1B0GV85 526 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ACOD1A6NK06 481 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 LRRC30A6NM36 301 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 PSMD9O00233 223 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 SBK2P0C263 348 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 HTR1FP30939 366 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 DCTDP32321 178 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 MMP16P51512 607 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 CXCR4P61073 352 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ROM1Q03395 351 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 TMED1Q13445 227 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 TMEM155Q4W5P6 130 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ZBTB49Q6ZSB9 765 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 LRRC28Q86X40 367 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 SLC35F2Q8IXU6 374 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 OR51G2Q8NGK0 314 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 STMN2Q93045 179 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 OR8B4Q96RC9 309 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 CLN6Q9NWW5 311 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 IMPAD1Q9NX62 359 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 ZNF391Q9UJN7 358 aa11.64□□□□□ -0.55
HERPUD1-218ENST00000569569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 TMEM269A0A1B0GVZ9 245 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 E9PQ18 207 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 ZNF670-ZNF695F2Z2N8 137 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 BAG2O95816 211 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 MSMBP08118 114 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 HNF1AP20823 631 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 PCMT1P22061 227 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 GSK3AP49840 483 aa11.63□□□□□ -0.55
HERPUD1-218ENST00000569569 RIDAP52758 137 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms