RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RPS2P15880 293 aaKnown RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 PRKACGP22612 351 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 CPT2P23786 658 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 GSTT1P30711 240 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 PSMB10P40306 273 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 CX3CR1P49238 355 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 ZNF121P58317 390 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 GRB2P62993 217 aaKnown RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 CBX1P83916 185 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 FAM3AP98173 230 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 PAX8Q06710 450 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 BNIP1Q12981 228 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SCGB2A2Q13296 93 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 EIF2B1Q14232 305 aaKnown RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 GINS1Q14691 196 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 ESCO2Q56NI9 601 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 PLBD1Q6P4A8 553 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 FAHD1Q6P587 224 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 LYPD2Q6UXB3 125 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 ZNF841Q6ZN19 808 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SPATC1Q76KD6 591 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 RHOUQ7L0Q8 258 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SLC16A9Q7RTY1 509 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SPATA24Q86W54 205 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 ERI1Q8IV48 349 aaKnown RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 PARP8Q8N3A8 854 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 BBS1Q8NFJ9 593 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 OTOSQ8NHW6 89 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 NANPQ8TBE9 248 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 SPRYD4Q8WW59 207 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 ERGIC1Q969X5 290 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 UTP4Q969X6 686 aaKnown RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 ZMYND19Q96E35 227 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 C1orf147Q96MC9 270 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
CDH3-209ENST00000569080 SLC22A4Q9H015 551 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 TOR3AQ9H497 397 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 OCEL1Q9H607 264 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 CENPMQ9NSP4 180 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 UFSP2Q9NUQ7 469 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 DNAJB9Q9UBS3 223 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 PCDHB10Q9UN67 800 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
CDH3-209ENST00000569080 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 IGHV2-70DA0A0C4DH43 119 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 CCDC182A6NF36 153 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 LRRC30A6NM36 301 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 C22orf46C9J442 243 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 TNFRSF13BO14836 293 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 GSC2O15499 205 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 XRCC2O43543 280 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 GMDSO60547 372 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 E2F6O75461 281 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 PPIAL4GP0DN37 164 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 EGR1P18146 543 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 ACKR3P25106 362 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 POU1F1P28069 291 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 CD80P33681 288 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 PSMA6P60900 246 aaKnown RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 OR8G1Q15617 311 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 OR8B8Q15620 311 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 TMEM236Q5W0B7 351 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 DCDC5Q6ZRR9 648 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 CPOQ8IVL8 374 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 C11orf53Q8IXP5 236 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 C1orf87Q8N0U7 546 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 GCSAMQ8N6F7 178 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 ZDHHC22Q8N966 263 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 PLPP7Q8NBV4 271 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 C19orf18Q8NEA5 215 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 ZNF418Q8TF45 676 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 C22orf15Q8WYQ4 148 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 SGK3Q96BR1 496 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 ZNF48Q96MX3 618 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 FGF23Q9GZV9 251 aaPredicted RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 OR51V1Q9H2C8 321 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 PPP1R3EQ9H7J1 279 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 SMURF1Q9HCE7 757 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 OR5V1Q9UGF6 321 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 NOP16Q9Y3C1 178 aaKnown RBP6.52□□□□□ -1.37
CDH3-209ENST00000569080 PPIAL4AQ9Y536 164 aa6.52□□□□□ -1.37
CDH3-209ENST00000569080 GGT3PA6NGU5 568 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PRR23D1E9PI22 279 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 M0R129 80 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 GNGT2O14610 69 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PHYHO14832 338 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 TBX1O43435 398 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 TIPRLO75663 272 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PLATP00750 562 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 LHBP01229 141 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 HMGN1P05114 100 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ANXA2P07355 339 aaKnown RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 LYNP07948 512 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PRR23D2P0DMB1 279 aaPredicted RBP6.51□□□□□ -1.37
CDH3-209ENST00000569080 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ANXA8P13928 327 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 ALOX5APP20292 161 aa6.51□□□□□ -1.37
CDH3-209ENST00000569080 PAICSP22234 425 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms