RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KIR3DL2P43630 455 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 NANOS3P60323 173 aaKnown RBP15.36■□□□□ 0.05
COMMD4-222ENST00000568034 FAM3AP98173 230 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 IRF3Q14653 427 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 TIGD6Q17RP2 521 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 RNLSQ5VYX0 342 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 FDX2Q6P4F2 183 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 Q6ZR03 302 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 PGAP1Q75T13 922 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 MRPL21Q7Z2W9 205 aaKnown RBP15.36■□□□□ 0.05
COMMD4-222ENST00000568034 ELMOD2Q8IZ81 293 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 OR2G2Q8NGZ5 317 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 SPRYD4Q8WW59 207 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-222ENST00000568034 PIGTQ969N2 578 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 MRPL48Q96GC5 212 aaKnown RBP15.36■□□□□ 0.05
COMMD4-222ENST00000568034 RGCCQ9H4X1 137 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 OPA3Q9H6K4 179 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 ERVK-18Q9QC07 812 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 TPRKBQ9Y3C4 175 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 SNX5Q9Y5X3 404 aa15.36■□□□□ 0.05
COMMD4-222ENST00000568034 ZSCAN5BA6NJL1 495 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 M0R233 179 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 TIMM8AO60220 97 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-222ENST00000568034 HTR1AP08908 422 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 TACSTD2P09758 323 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 DNASE1P24855 282 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 SELENOVP59797 346 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 MED21Q13503 144 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 OR8B8Q15620 311 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 GFOD2Q3B7J2 385 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 XAF1Q6GPH4 301 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 OR5AS1Q8N127 324 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 ZCCHC24Q8N2G6 241 aaKnown RBP15.35■□□□□ 0.05
COMMD4-222ENST00000568034 KLHL36Q8N4N3 616 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 OR52N1Q8NH53 320 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 RPS4Y2Q8TD47 263 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 CDCA4Q9BXL8 241 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 CXorf56Q9H5V9 222 aa15.35■□□□□ 0.05
COMMD4-222ENST00000568034 A0A1B0GTI1 187 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 CD300LBA8K4G0 201 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 NDUFS7O75251 213 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 LALBAP00709 142 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 MT-ND2P03891 347 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 MT-ND5P03915 603 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 NAT2P11245 290 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 ACKR3P25106 362 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 NKPD1Q17RQ9 610 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 DEFB113Q30KQ7 82 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 BCL2L15Q5TBC7 163 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 Q6ZSR3 168 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 OR56B2PQ8NGI1 322 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 OR51E1Q8TCB6 317 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 MYDGFQ969H8 173 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 SORCS2Q96PQ0 1159 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 MYCBPQ99417 103 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-222ENST00000568034 GSX2Q9BZM3 304 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 GPR84Q9NQS5 396 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 BEX4Q9NWD9 120 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-222ENST00000568034 FRRS1LQ9P0K9 344 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 ARID1AO14497 2285 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 MAST4O15021 2626 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 CCDC168Q8NDH2 2452 aa15.34■□□□□ 0.05
COMMD4-222ENST00000568034 A0A1B0GWJ7 208 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 C17orf100A8MU93 164 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 SELEP16581 610 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 CCL1P22362 96 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 PTH2RP49190 550 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 TGM4P49221 684 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 GSK3AP49840 483 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 GTF2A1P52655 376 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-222ENST00000568034 TMPRSS11AQ6ZMR5 421 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 NANOGP1Q8N7R0 232 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 PLPP7Q8NBV4 271 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 BHLHE23Q8NDY6 225 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 OR8G5Q8NG78 346 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 SLC30A2Q9BRI3 323 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 TPK1Q9H3S4 243 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 MSL2Q9HCI7 577 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 CHCHD3Q9NX63 227 aaKnown RBP15.33■□□□□ 0.04
COMMD4-222ENST00000568034 CGGBP1Q9UFW8 167 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-222ENST00000568034 ZNF391Q9UJN7 358 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 FBXO9Q9UK97 447 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-222ENST00000568034 EDARQ9UNE0 448 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 LSM2Q9Y333 95 aaKnown RBP15.33■□□□□ 0.04
COMMD4-222ENST00000568034 PMF1-BGLAPU3KQ54 211 aa15.33■□□□□ 0.04
COMMD4-222ENST00000568034 AKAP9Q99996 3911 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 OR4C45A6NMZ5 311 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 P2RY10O00398 339 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 RGS10O43665 173 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 IGHV1-46P01743 117 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 ADH4P08319 380 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 CFL1P23528 166 aaKnown RBP15.32■□□□□ 0.04
COMMD4-222ENST00000568034 CCR9P51686 369 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 GABARAPL2P60520 117 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 MRPL28Q13084 256 aaKnown RBP15.32■□□□□ 0.04
COMMD4-222ENST00000568034 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
COMMD4-222ENST00000568034 MOGQ16653 247 aa15.32■□□□□ 0.04
COMMD4-222ENST00000568034 PRSS48Q7RTY5 328 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms