RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SDHAF2Q9NX18 166 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 SMPD3Q9NY59 655 aaPredicted RBP2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 DCDC2Q9UHG0 476 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 KCNIP3Q9Y2W7 256 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 PPIL1Q9Y3C6 166 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 AP4S1Q9Y587 144 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 ATAD5Q96QE3 1844 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 CNOT1A5YKK6 2376 aaKnown RBP2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 NID2Q14112 1375 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 LOC285556D6RIA3 1793 aa2.46□□□□□ -2.02
HERPUD1-212ENST00000567944 CLUHO75153 1309 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 NRCAMQ92823 1304 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 WDFY4Q6ZS81 3184 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 DOCK2Q92608 1830 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF236Q9UL36 1845 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 KMT2BQ9UMN6 2715 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 IGHV2-70DA0A0C4DH43 119 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 A0A1B0GV72 72 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 A0A1B0GVL5 298 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 GSAPA4D1B5 854 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RFPL4AA6NLU0 287 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CENPXA8MT69 81 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 A8MUA0 341 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RFPL4AL1F8VTS6 287 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 H7C2Y5 167 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 I3L4J1 428 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 hCG_2039718K7EN88 272 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 M0QZ92 97 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 BHLHE40O14503 412 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ABCD4O14678 606 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PHYHO14832 338 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZBTB5O15062 677 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SGCEO43556 437 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 OR1F1O43749 312 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 HCN1O60741 890 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 B4GALT2O60909 372 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SPAG7O75391 227 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF806P0C7X5 589 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CBR1P16152 277 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PGCP20142 388 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 HTR2AP28223 471 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 HSD11B1P28845 292 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ARR3P36575 388 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 MAGEA3P43357 314 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 NAMPTP43490 491 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 HCAR3P49019 387 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CDC34P49427 236 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 AKR1D1P51857 326 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CLDN8P56748 225 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RPS14P62263 151 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 LIPEQ05469 1076 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PDK2Q15119 407 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PDK3Q15120 406 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 TGFBIQ15582 683 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CDNFQ49AH0 187 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF658BQ4V348 819 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 TMEM41BQ5BJD5 291 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CDKL4Q5MAI5 379 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 C6orf52Q5T4I8 152 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PLCXD3Q63HM9 321 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CCDC137Q6PK04 289 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 FAM92BQ6ZTR7 304 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 NT5DC3Q86UY8 548 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 DHFR2Q86XF0 187 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF573Q86YE8 665 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 KATNAL2Q8IYT4 538 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 STK40Q8N2I9 435 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SVOPLQ8N434 492 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RIBC1Q8N443 379 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 C17orf78Q8N4C9 275 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 KIR3DL3Q8N743 410 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CCDC54Q8NEL0 328 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 OR51G2Q8NGK0 314 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 OR5L2Q8NGL0 311 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF596Q8TC21 504 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 BLOC1S5Q8TDH9 187 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 HTR3CQ8WXA8 447 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SRSF12Q8WXF0 261 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 S100ZQ8WXG8 99 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CHCHD10Q8WYQ3 142 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 GTF2H4Q92759 462 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 OSTF1Q92882 214 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 NT5C3BQ969T7 300 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 C12orf43Q96C57 262 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 MS4A14Q96JA4 679 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF514Q96K75 400 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 DNAJC1Q96KC8 554 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PRRC1Q96M27 445 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 C12orf66Q96MD2 445 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RNF145Q96MT1 663 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 PPP1R2P1Q96PQ5 205 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 TGS1Q96RS0 853 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SEC22CQ9BRL7 303 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 C1orf50Q9BV19 199 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 MRPS26Q9BYN8 205 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 TM6SF2Q9BZW4 377 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 MAGT1Q9H0U3 335 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZDHHC11Q9H8X9 412 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SH2D2AQ9NP31 389 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms