RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 CHID1Q9BWS9 393 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 OPA3Q9H6K4 179 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 REEP1Q9H902 201 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
COMMD4-216ENST00000567023 TBC1D23Q9NUY8 699 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 SAMHD1Q9Y3Z3 626 aaKnown RBP11.89□□□□□ -0.51
COMMD4-216ENST00000567023 U3KQV3 271 aa11.89□□□□□ -0.51
COMMD4-216ENST00000567023 TRRAPQ9Y4A5 3859 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 CLDN34H7C241 214 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 PHYHO14832 338 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 PLATP00750 562 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 HKR1P10072 659 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 ANOS1P23352 680 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 PITPNBP48739 271 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 NPY4RP50391 375 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 KCNJ8Q15842 424 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 AWAT1Q58HT5 328 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-216ENST00000567023 SPERTQ8NA61 448 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF511Q8NB15 262 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 OR9Q1Q8NGQ5 310 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 SLAMF6Q96DU3 332 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 C1orf147Q96MC9 270 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF48Q96MX3 618 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-216ENST00000567023 COPS4Q9BT78 406 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 MMADHCQ9H3L0 296 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-216ENST00000567023 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 CMC2Q9NRP2 79 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 CLN8Q9UBY8 286 aa11.88□□□□□ -0.51
COMMD4-216ENST00000567023 C5orf63A6NC05 138 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 GGT3PA6NGU5 568 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF878C9JN71 531 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-216ENST00000567023 SOX14O95416 240 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 IFNGP01579 166 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 GYPBP06028 91 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 SPARCP09486 303 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 CLUP10909 449 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 DDOSTP39656 456 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 SLC15A1P46059 708 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 PARP8Q8N3A8 854 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 PAPD5Q8NDF8 572 aaKnown RBP11.87□□□□□ -0.51
COMMD4-216ENST00000567023 SGMS2Q8NHU3 365 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 ADAT1Q9BUB4 502 aaKnown RBP11.87□□□□□ -0.51
COMMD4-216ENST00000567023 MS4A7Q9GZW8 240 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-216ENST00000567023 CENPMQ9NSP4 180 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 UFSP2Q9NUQ7 469 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 ARMC1Q9NVT9 282 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
COMMD4-216ENST00000567023 ARRDC5A6NEK1 342 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 XRCC2O43543 280 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 NDUFA2O43678 99 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
COMMD4-216ENST00000567023 ZNF3P17036 446 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 MTNR1AP48039 350 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 PRKXP51817 358 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 BPIFB3P59826 476 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
COMMD4-216ENST00000567023 MZT1Q08AG7 82 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 FOXL1Q12952 345 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 TAF13Q15543 124 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 ASRGL1Q7L266 308 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 SPATA24Q86W54 205 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 OR10G2Q8NGC3 310 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 OR6K6Q8NGW6 343 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 FEVQ99581 238 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 NIPSNAP1Q9BPW8 284 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
COMMD4-216ENST00000567023 TOR3AQ9H497 397 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 MARCH7Q9H992 704 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 TRIM36Q9NQ86 728 aa11.86□□□□□ -0.51
COMMD4-216ENST00000567023 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 RIIAD1A6NNX1 92 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 LGALS8O00214 317 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 LHBP01229 141 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 APOC1P02654 83 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 LIPFP07098 398 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 SLC2A1P11166 492 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 EGR1P18146 543 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 FAM3AP98173 230 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 BAMBIQ13145 260 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 CD276Q5ZPR3 534 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 PRSS45Q7RTY3 260 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 C19orf18Q8NEA5 215 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 OR56B2PQ8NGI1 322 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 RNF133Q8WVZ7 376 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 SLC25A28Q96A46 364 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 SP140LQ9H930 580 aa11.85□□□□□ -0.51
COMMD4-216ENST00000567023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms