RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 OTULINQ96BN8 352 aa12.25□□□□□ -0.45
FANCA-220ENST00000566409 SGK3Q96BR1 496 aa12.25□□□□□ -0.45
FANCA-220ENST00000566409 INTS14Q96SY0 518 aa12.25□□□□□ -0.45
FANCA-220ENST00000566409 CADM1Q9BY67 442 aaKnown RBP12.25□□□□□ -0.45
FANCA-220ENST00000566409 OR51V1Q9H2C8 321 aa12.25□□□□□ -0.45
FANCA-220ENST00000566409 GGT3PA6NGU5 568 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 GSC2O15499 205 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 GMDSO60547 372 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 DNAJC8O75937 253 aaPredicted RBP12.24□□□□□ -0.45
FANCA-220ENST00000566409 OSMP13725 252 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 RPS2P15880 293 aaKnown RBP12.24□□□□□ -0.45
FANCA-220ENST00000566409 OPRL1P41146 370 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 CX3CR1P49238 355 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 FAM3AP98173 230 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 PAX8Q06710 450 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 TMEM236Q5W0B7 351 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 BBS1Q8NFJ9 593 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 OR56B2PQ8NGI1 322 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 OR6N2Q8NGY6 317 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
FANCA-220ENST00000566409 ERGIC1Q969X5 290 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 ZMYND19Q96E35 227 aaPredicted RBP12.24□□□□□ -0.45
FANCA-220ENST00000566409 SLC22A4Q9H015 551 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 PPP1R3EQ9H7J1 279 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 ESM1Q9NQ30 184 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
FANCA-220ENST00000566409 DNAJB9Q9UBS3 223 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 LRCH1Q9Y2L9 728 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 PPIAL4AQ9Y536 164 aa12.24□□□□□ -0.45
FANCA-220ENST00000566409 SELENOFO60613 162 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 E2F6O75461 281 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
FANCA-220ENST00000566409 SCGB2A2Q13296 93 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 KLHL12Q53G59 568 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 ESCO2Q56NI9 601 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 ZNF841Q6ZN19 808 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 SLC16A9Q7RTY1 509 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 CPOQ8IVL8 374 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 C1orf87Q8N0U7 546 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 ZFAND2BQ8WV99 257 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 UTP4Q969X6 686 aaKnown RBP12.23□□□□□ -0.45
FANCA-220ENST00000566409 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
FANCA-220ENST00000566409 SSBP3Q9BWW4 388 aaPredicted RBP12.23□□□□□ -0.45
FANCA-220ENST00000566409 MIOXQ9UGB7 285 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 KLHDC2Q9Y2U9 406 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
FANCA-220ENST00000566409 PRR23D1E9PI22 279 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 TNFRSF13BO14836 293 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 XRCC2O43543 280 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 ANXA2P07355 339 aaKnown RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 PRR23D2P0DMB1 279 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 ANXA8P13928 327 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 HOXB6P17509 224 aaKnown RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 SLC2A5P22732 501 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 CPT2P23786 658 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 PSMB10P40306 273 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 SLC15A1P46059 708 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 BNIP1Q12981 228 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 ZNF826PQ6ZT77 177 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 FAM57BQ71RH2 274 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 RHOUQ7L0Q8 258 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 WDR86Q86TI4 376 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 C11orf53Q8IXP5 236 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 BCL6BQ8N143 479 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 ZDHHC22Q8N966 263 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 PLPP7Q8NBV4 271 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 OR11L1Q8NGX0 322 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 OTOSQ8NHW6 89 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 NEIL1Q96FI4 390 aaPredicted RBP12.22□□□□□ -0.45
FANCA-220ENST00000566409 TOR3AQ9H497 397 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 DNAJC27Q9NZQ0 273 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 ZNF69Q9UC07 566 aa12.22□□□□□ -0.45
FANCA-220ENST00000566409 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 TBX1O43435 398 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 FCN3O75636 299 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 TIPRLO75663 272 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 HMGN1P05114 100 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 IRF2P14316 349 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 PAICSP22234 425 aaKnown RBP12.21□□□□□ -0.45
FANCA-220ENST00000566409 HSD11B1P28845 292 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 PITPNBP48739 271 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 DAPP51397 102 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 HCCSP53701 268 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 GNB2P62879 340 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 SFRP4Q6FHJ7 346 aaPredicted RBP12.21□□□□□ -0.45
FANCA-220ENST00000566409 FAHD1Q6P587 224 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 DCDC5Q6ZRR9 648 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 SHFQ7M4L6 423 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 BPIFB2Q8N4F0 458 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 RAB40AQ8WXH6 277 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 REEP6Q96HR9 211 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 SUCNR1Q9BXA5 334 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 FN3KRPQ9HA64 309 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 ZNF556Q9HAH1 456 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 SLC25A19Q9HC21 320 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 BRD7Q9NPI1 651 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms