RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TSGA10Q9BZW7 698 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 OR8D2Q9GZM6 311 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 IL22Q9GZX6 179 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DRC3Q9H069 523 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 VPS37BQ9H9H4 285 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PARVBQ9HBI1 364 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PROK2Q9HC23 129 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TAS2R13Q9NYV9 303 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 EHFQ9NZC4 300 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SPRR3Q9UBC9 169 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TBK1Q9UHD2 729 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GNPTGQ9UJJ9 305 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PTBP2Q9UKA9 531 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 SNX12Q9UMY4 172 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MMACHCQ9Y4U1 282 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ASB4Q9Y574 426 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TIMM22Q9Y584 194 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 HEBP2Q9Y5Z4 205 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SAR1BQ9Y6B6 198 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 KCNE3Q9Y6H6 103 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 AP1M2Q9Y6Q5 423 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 V9GYY5 206 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 SPACA6W5XKT8 324 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CCDC168Q8NDH2 2452 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DSCAMO60469 2012 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CHD3Q12873 2000 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 F8P00451 2351 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FN1P02751 2386 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 DOPEY1Q5JWR5 2465 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 YLPM1P49750 1951 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 IGLV3-12A0A075B6K2 115 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 KCNE1BA0A087WTH5 132 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TRBV11-1A0A0K0K1C0 115 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TUBAL3A6NHL2 446 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FAM159BA6NKW6 160 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 GJE1A6NN92 205 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SUPT3HB4E1H0 165 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NPIPA7E9PJI5 369 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PSMD12O00232 456 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 PGRMC1O00264 195 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 PLPP1O14494 284 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 UBFD1O14562 309 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 ZSCAN12O43309 604 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 DPM1O60762 260 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC19A2O60779 497 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CTNSO60931 367 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 BCAS1O75363 584 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 VPS26AO75436 327 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SUPT3HO75486 399 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 STK16O75716 305 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 OR4F21O95013 312 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NSA2O95478 260 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 AIFM1O95831 613 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TGM6O95932 706 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PDYNP01213 254 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 IGHV3-48P01763 117 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CATP04040 527 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 CLPSP04118 112 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RPN2P04844 631 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SERPINA7P05543 415 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 C8GP07360 202 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 UQCRHP07919 91 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SERPINA6P08185 405 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ANXA5P08758 320 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 HBQ1P09105 142 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 HIST1H2AGP0C0S8 130 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 OR8U8P0C7N1 319 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 LINC00032P0C843 101 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC35E2BP0CK96 405 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MPC1LP0DKB6 136 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NPIPA8P0DM63 369 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ERGP11308 486 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SFTPCP11686 197 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MLNP12872 115 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PGAM1P18669 254 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CCNA2P20248 432 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CPN2P22792 545 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ATP5A1P25705 553 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 HPDP32754 393 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 MAGEA6P43360 314 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MAGEB1P43366 347 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RFX3P48380 749 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CYB561P49447 251 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 XKP51811 444 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TDGF1P3P51864 188 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FOXA1P55317 472 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NME5P56597 212 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MLF1P58340 268 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC26A5P58743 744 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RAB10P61026 200 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RPS15AP62244 130 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 ACTA2P62736 377 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 HERVK_113P63132 956 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ERVK-8P63133 956 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ACTC1P68032 377 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SARNPP82979 210 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 HMGCS1Q01581 520 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 IRF8Q02556 426 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PLOD1Q02809 727 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms