RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 NOP16Q9Y3C1 178 aaKnown RBP17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 NSD1Q96L73 2696 aaPredicted RBP17.9■□□□□ 0.46
SHCBP1-205ENST00000566016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.89■□□□□ 0.467e-9■■■■■ 36.7
SHCBP1-205ENST00000566016 DYSFO75923 2080 aa17.89■□□□□ 0.46
SHCBP1-205ENST00000566016 hCG_38984A0A1B0GV85 526 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 TMEM269A0A1B0GVZ9 245 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 PSMD9O00233 223 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 WBP4O75554 376 aaKnown RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 KRT8P05787 483 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 CRYBB2P43320 205 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 IL5RAQ01344 420 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 RIN1Q13671 783 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 ZNF771Q7L3S4 317 aaPredicted RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 SSX6Q7RTT6 188 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 OR5AS1Q8N127 324 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 BHLHE23Q8NDY6 225 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 NRG4Q8WWG1 115 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 REEP6Q96HR9 211 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 TTTY10Q9BZA0 68 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 BRD7Q9NPI1 651 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 MRPL15Q9P015 296 aaKnown RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 IL19Q9UHD0 177 aa17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 NUFIP1Q9UHK0 495 aaKnown RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 MRM2Q9UI43 246 aaKnown RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 RPL36Q9Y3U8 105 aaKnown RBP17.89■□□□□ 0.45
SHCBP1-205ENST00000566016 A0A096LNT2 108 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 A0A0U1RQV5 110 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 LILRA1O75019 489 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 SRSF10O75494 262 aaKnown RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 RP2O75695 350 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 ISL1P61371 349 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 TNFAIP6P98066 277 aaPredicted RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 RAB40BQ12829 278 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 TSTQ16762 297 aaKnown RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 CIARTQ8N365 385 aaPredicted RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 OR2Z1Q8NG97 314 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 OR8B12Q8NGG6 310 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 SPRYD4Q8WW59 207 aaPredicted RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 SGK3Q96BR1 496 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 LGALS12Q96DT0 336 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 TBX5Q99593 518 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 VCX3BQ9H321 246 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 TMEM100Q9NV29 134 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 N6AMT1Q9Y5N5 214 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 IGHV1-69-2A0A0G2JMI3 117 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 GGT3PA6NGU5 568 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 TPD52L2O43399 206 aaKnown RBP17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 CLIC3O95833 236 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 NR4A2P43354 598 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 FAM3AP98173 230 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 OR8B8Q15620 311 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 PLEKHG7Q6ZR37 379 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 ACBD7Q8N6N7 88 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 OR56B2PQ8NGI1 322 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 R4GMQ9 66 aa17.88■□□□□ 0.45
SHCBP1-205ENST00000566016 RNF223E7ERA6 249 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 MLNRO43193 412 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 FADS2O95864 444 aaKnown RBP17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 IGHA1P01876 353 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 INHBBP09529 407 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 TNFRSF1AP19438 455 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 PRSS12P56730 875 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 TMEM33P57088 247 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 ZNF85Q03923 595 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 SNCBQ16143 134 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 CARTPTQ16568 116 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 KLBQ86Z14 1044 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 EGFL6Q8IUX8 553 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 C8orf59Q8N0T1 100 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 TFAP2CQ92754 450 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 YIPF5Q969M3 257 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 MYCBPQ99417 103 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 INPP5EQ9NRR6 644 aa17.87■□□□□ 0.45
SHCBP1-205ENST00000566016 METTL15A6NJ78 407 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 LOC110117498-PIK3R3F6TDL0 507 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 IGLV3-1P01715 115 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 LOXL1Q08397 574 aaPredicted RBP17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 CDONQ4KMG0 1287 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 KCTD20Q7Z5Y7 419 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 FTMTQ8N4E7 242 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 CELF2-AS1Q8N7Q2 184 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 CSNK2A3Q8NEV1 391 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 OR10AD1Q8NGE0 317 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 BPESC1Q9GZL8 116 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 PBOV1Q9GZY1 135 aa17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 ZNF275Q9NSD4 429 aaPredicted RBP17.86■□□□□ 0.45
SHCBP1-205ENST00000566016 ABCA2Q9BZC7 2435 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 LYNX1G3V0Z9 82 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 MAGEB4O15481 346 aaPredicted RBP17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 GMDSO60547 372 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 ATP6V1G2O95670 118 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 PNPP00491 289 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 GNAO1P09471 354 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 LYNX1P0DP58 116 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 COL8A2P25067 703 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 GSK3AP49840 483 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 ACTA2P62736 377 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 ACTG2P63267 376 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 MFGE8Q08431 387 aaPredicted RBP17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 HFEQ30201 348 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms