RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 UBQLN2Q9UHD9 624 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 HSPB11Q9Y547 144 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 CACNG2Q9Y698 323 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 U3KQ87 197 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 ZFHX4Q86UP3 3567 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 TRPM6Q9BX84 2022 aa3.61□□□□□ -1.83
LINC00561-201ENST00000565815 LRP4O75096 1905 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 UBR5O95071 2799 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ANXA2P2A6NMY6 339 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CHP2O43745 196 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 FMO6PO60774 539 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 REM1O75628 298 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 GATBO75879 557 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 KLK3P07288 261 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ADRA2AP08913 450 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TNNI3P19429 210 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 AHCYP23526 432 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CCT3P49368 545 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CCR8P51685 355 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 GRK1Q15835 563 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZSWIM7Q19AV6 140 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PGGHGQ32M88 737 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 Q5BKY6 102 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 LRRC73Q5JTD7 316 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF57Q68EA5 555 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 LAMTOR1Q6IAA8 161 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF322Q6U7Q0 402 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 Q6ZS92 163 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 RFPL4BQ6ZWI9 263 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 BTN2A1Q7KYR7 527 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZER1Q7Z7L7 766 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TRPT1Q86TN4 253 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 AMIGO1Q86WK6 493 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 C17orf64Q86WR6 236 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 RASGEF1AQ8N9B8 481 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 FAM71CQ8NEG0 241 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 DMBX1Q8NFW5 382 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR56B4Q8NH76 319 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 LRRC20Q8TCA0 184 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR1E3Q8WZA6 343 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CIDECQ96AQ7 238 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 UPRTQ96BW1 309 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TM4SF18Q96CE8 201 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR2M4Q96R27 311 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SECISBP2Q96T21 854 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 HDHD2Q9H0R4 259 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CXXC4Q9H2H0 198 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR51J1Q9H342 316 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PLEKHA1Q9HB21 404 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 LHX9Q9NQ69 397 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PLSCR3Q9NRY6 295 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 COMMD3Q9UBI1 195 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CYB5R1Q9UHQ9 305 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SDK2Q58EX2 2172 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 HECTD1Q9ULT8 2610 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 MEIKINA0A087WXM9 373 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 A0A0A6YYC8 382 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 A0A0G2JMP0 313 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 I3L1I5 382 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 J3QRE1 110 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 BTN3A3O00478 584 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SURF4O15260 269 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 RNF13O43567 381 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 HPGDSO60760 199 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ARL6IP5O75915 188 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 GOSR1O95249 250 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TGM6O95932 706 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 IFNA16P05015 189 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 FHP07954 510 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 GUSBP08236 651 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SULT1A3P0DMM9 295 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SULT1A4P0DMN0 295 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PAICSP22234 425 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 MAPK3P27361 379 aaPredicted RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CCL11P51671 97 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 MXD1Q05195 221 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TGM3Q08188 693 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 GPR176Q14439 515 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 EXT1Q16394 746 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 MAPK14Q16539 360 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TMEM220Q6QAJ8 160 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 HSD11B1LQ7Z5J1 315 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 C5orf24Q7Z6I8 188 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 TGIF2LYQ8IUE0 185 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 IQCF2Q8IXL9 164 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ACBD7Q8N6N7 88 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF680Q8NEM1 530 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR2T33Q8NG76 320 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR8H1Q8NGG4 311 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR6K2Q8NGY2 324 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 OR2L2Q8NH16 312 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 CT55Q8WUE5 264 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF524Q96C55 264 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 SNRNP40Q96DI7 357 aaKnown RBP3.6□□□□□ -1.83
LINC00561-201ENST00000565815 DTD2Q96FN9 168 aa3.6□□□□□ -1.83
LINC00561-201ENST00000565815 RIOK2Q9BVS4 552 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms