RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 IGHV4-38-2P0DP08 117 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 HKR1P10072 659 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 SPI1P17947 270 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ATP6V1B2P21281 511 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GSTT1P30711 240 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GRK5P34947 590 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GNALP38405 381 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 DDOSTP39656 456 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 CD200P41217 278 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GATA4P43694 442 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 BLVRAP53004 296 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 SLC25A1P53007 311 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 HOXA4Q00056 320 aaPredicted RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 SLC9A3R2Q15599 337 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 TIGD6Q17RP2 521 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 TEX30Q5JUR7 227 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GPR157Q5UAW9 335 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 WDR25Q64LD2 544 aaPredicted RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF770Q6IQ21 691 aaPredicted RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 C16orf87Q6PH81 154 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 SHISA2Q6UWI4 295 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF841Q6ZN19 808 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF826PQ6ZT77 177 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 FAM57BQ71RH2 274 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ARHGAP24Q8N264 748 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 OR8D4Q8NGM9 314 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 OR6N2Q8NGY6 317 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 OR4Q3Q8NH05 313 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 TEX47Q8TBZ9 253 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 GIPC3Q8TF64 312 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 SGK3Q96BR1 496 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 UPRTQ96BW1 309 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZMYND19Q96E35 227 aaPredicted RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF48Q96MX3 618 aaPredicted RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 HIST1H2AAQ96QV6 131 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 FEVQ99581 238 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 NIPSNAP1Q9BPW8 284 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 PCGF1Q9BSM1 259 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 THTPAQ9BU02 230 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ADAT1Q9BUB4 502 aaKnown RBP5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF747Q9BV97 191 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 CHID1Q9BWS9 393 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 OR51V1Q9H2C8 321 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 MUC13Q9H3R2 512 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 MAGIXQ9H6Y5 334 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 MED20Q9H944 212 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ZNF556Q9HAH1 456 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 TRIM36Q9NQ86 728 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 ARFGEF3Q5TH69 2177 aa5.35□□□□□ -1.55
TCF4-228ENST00000565393 IGHV3OR15-7A0A075B7D8 119 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 TRAV40A0A0B4J280 105 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 A0A1B0GWJ7 208 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 TCRBV5S2A0A599 114 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 DHRS12A0PJE2 317 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 OOEPA6NGQ2 149 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ZNF879B4DU55 563 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ZNF878C9JN71 531 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 PRR23D1E9PI22 279 aaPredicted RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 XRCC2O43543 280 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ENSAO43768 121 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 PRR23D2P0DMB1 279 aaPredicted RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 PPIAL4GP0DN37 164 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 RAP2AP10114 183 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ZNF3P17036 446 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 PAICSP22234 425 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 CALB2P22676 271 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 OMGP23515 440 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 NAA10P41227 235 aaPredicted RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 CX3CR1P49238 355 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 NPY4RP50391 375 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ARF6P62330 175 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 GRB2P62993 217 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 PAX2Q02962 417 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 GINS1Q14691 196 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 DEFB112Q30KQ8 113 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 KLHL12Q53G59 568 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 BRD3OSQ6XYD6 125 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 SHFQ7M4L6 423 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 DPY19L4Q7Z388 723 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ERI1Q8IV48 349 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 TIGD4Q8IY51 512 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 IQCF1Q8N6M8 205 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 PNLDC1Q8NA58 520 aaKnown RBP5.34□□□□□ -1.55
TCF4-228ENST00000565393 CCDC197Q8NCU1 140 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 OR10G2Q8NGC3 310 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 OR56B2PQ8NGI1 322 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 Q8TCH9 128 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 TAF15Q92804 592 aaKnown RBP eCLIP5.34□□□□□ -1.55
TCF4-228ENST00000565393 REEP6Q96HR9 211 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 PGAM5Q96HS1 289 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 INTS14Q96SY0 518 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 ABHD6Q9BV23 337 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 DGCR6LQ9BY27 220 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 NMNAT2Q9BZQ4 307 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 OR10A2Q9H208 303 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 TOR3AQ9H497 397 aa5.34□□□□□ -1.55
TCF4-228ENST00000565393 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms