RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 SNRPEP62304 92 aaKnown RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ID2Q02363 134 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 AKR1C1Q04828 323 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 PPP1R1AQ13522 171 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ENPP2Q13822 863 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ERV3-1Q14264 604 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 GPR18Q14330 331 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 HABP2Q14520 560 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SLC17A1Q14916 467 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ZNF74Q16587 644 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 MST1LQ2TV78 715 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 CDNFQ49AH0 187 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SCGB2B2Q4G0G5 96 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ALG10Q5BKT4 473 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 IGSF11Q5DX21 431 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 RNASE10Q5GAN6 216 aaKnown RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TCEAL5Q5H9L2 206 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 EEF1A1P5Q5VTE0 462 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TMEM244Q5VVB8 128 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TMEM225Q6GV28 225 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 WBP2NLQ6ICG8 309 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 EIF5AL1Q6IS14 154 aaKnown RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 FBXO42Q6P3S6 717 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 PRSS54Q6PEW0 395 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ZNF704Q6ZNC4 412 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ZNF600Q6ZNG1 722 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TAF8Q7Z7C8 310 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 BIVMQ86UB2 503 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 NAA40Q86UY6 237 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TMEM200AQ86VY9 491 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ZFP82Q8N141 532 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 PAQR4Q8N4S7 273 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OR4E2Q8NGC2 313 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OR52R1Q8NGF1 315 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OR10AC1Q8NH08 325 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 RNF128Q8TEB7 428 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TCTEX1D2Q8WW35 142 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OIT3Q8WWZ8 545 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 LCN9Q8WX39 176 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ASB17Q8WXJ9 295 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SMARCD2Q92925 531 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SLC22A18Q96BI1 424 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SMIM8Q96KF7 97 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OR5B2Q96R09 309 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 OR8B4Q96RC9 309 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 ULBP3Q9BZM4 244 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SYT4Q9H2B2 425 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 KCNK15Q9H427 330 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 TUBA4BQ9H853 241 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SEBOXQ9HB31 216 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 RHOFQ9HBH0 211 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 GSN-AS1Q9NRJ2 163 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 CYTL1Q9NRR1 136 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SLC22A11Q9NSA0 550 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 RNF186Q9NXI6 227 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 LRFN1Q9P244 771 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 METTL1Q9UBP6 276 aaKnown RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 CKLFQ9UBR5 152 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 DNAJB11Q9UBS4 358 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 LPAR3Q9UBY5 353 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SHPKQ9UHJ6 478 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 KLK13Q9UKR3 277 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 FARSAQ9Y285 508 aaKnown RBP4.2□□□□□ -1.74
CAPN3-212ENST00000564503 SLC17A4Q9Y2C5 497 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 WIF1Q9Y5W5 379 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 KPTNQ9Y664 436 aa4.2□□□□□ -1.74
CAPN3-212ENST00000564503 MYO7BQ6PIF6 2116 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 TNRC6BQ9UPQ9 1833 aaKnown RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 DOCK8Q8NF50 2099 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 IGKV1D-42A0A075B6H8 117 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 A0A087WV48 116 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 A0A1B0GTH9 108 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 A0A1W2PPC1 479 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 LOC390937A0A1W2PQ73 354 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 MEX3AA1L020 520 aaKnown RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 CPED1A4D0V7 1026 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 SERINC4A6NH21 518 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 OR52A4PA6NMU1 304 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 EEF1E1-BLOC1S5C9J1V9 151 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 NPIPB9F8W1W9 429 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 SMAD9O15198 467 aaKnown RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 MBTPS2O43462 519 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 TNFSF14O43557 240 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 LATO43561 262 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 OR2T1O43869 369 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 OR10H2O60403 315 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 EIF1BO60739 113 aaKnown RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 ICOSLGO75144 302 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 STK17BO94768 372 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 DUS4LO95620 317 aaKnown RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 SCGB1D1O95968 90 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 CSTAP01040 98 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 MT-ND4LP03901 98 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 ERCC1P07992 297 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-212ENST00000564503 QDPRP09417 244 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 SFTA3P0C7M3 94 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 ASAH2BP0C7U1 165 aa4.19□□□□□ -1.74
CAPN3-212ENST00000564503 FAM157CP0CG43 387 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms