RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SLC15A1P46059 708 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 SCGB2A2Q13296 93 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 KLHL12Q53G59 568 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 ESCO2Q56NI9 601 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 CPOQ8IVL8 374 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 C1orf87Q8N0U7 546 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 C19orf18Q8NEA5 215 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 SEMA6DQ8NFY4 1073 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 Q8TCH9 128 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 TMEM246Q9BRR3 403 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 SLC22A4Q9H015 551 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 TOR3AQ9H497 397 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 MRPL15Q9P015 296 aaKnown RBP16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 KIF17Q9P2E2 1029 aa16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 POLR3KQ9Y2Y1 108 aaPredicted RBP16.73■□□□□ 0.27
SHCBP1-203ENST00000564272 FSHBP01225 129 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 HMGN1P05114 100 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 WNT2P09544 360 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 IRF2P14316 349 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 OPRL1P41146 370 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 NAA10P41227 235 aaPredicted RBP16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF121P58317 390 aaPredicted RBP16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF404Q494X3 552 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 FAM57BQ71RH2 274 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 SHFQ7M4L6 423 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 PRSS45Q7RTY3 260 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 KLBQ86Z14 1044 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 OR11L1Q8NGX0 322 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 NANPQ8TBE9 248 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 SPSB4Q96A44 273 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 PLEKHA8Q96JA3 519 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 OPA3Q9H6K4 179 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 SLC25A19Q9HC21 320 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 BRD7Q9NPI1 651 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 OR5V1Q9UGF6 321 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 LRCH1Q9Y2L9 728 aa16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 NOP16Q9Y3C1 178 aaKnown RBP16.72■□□□□ 0.27
SHCBP1-203ENST00000564272 GMDSO60547 372 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF12P17014 697 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 RPS7P62081 194 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF154Q13106 437 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 TIGD6Q17RP2 521 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 SLC16A9Q7RTY1 509 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 ZNF418Q8TF45 676 aaPredicted RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 ERGIC1Q969X5 290 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 UTP4Q969X6 686 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 REEP6Q96HR9 211 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 SLC6A7Q99884 636 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 SSBP3Q9BWW4 388 aaPredicted RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 FN3KRPQ9HA64 309 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 PAPOLBQ9NRJ5 636 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 KLHDC2Q9Y2U9 406 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 PPIAL4AQ9Y536 164 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 INSIG2Q9Y5U4 225 aa16.71■□□□□ 0.27
SHCBP1-203ENST00000564272 A0A0A6YYJ9 748 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 PRODHO43272 600 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 LYNP07948 512 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 H2BFMP0C1H6 154 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 GFOD2Q3B7J2 385 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 FAHD1Q6P587 224 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 OTOSQ8NHW6 89 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 SGK3Q96BR1 496 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 NRBF2Q96F24 287 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 NEIL1Q96FI4 390 aaPredicted RBP16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 TVP23BQ9NYZ1 205 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 ZNF319Q9P2F9 582 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 MIOXQ9UGB7 285 aa16.7■□□□□ 0.26
SHCBP1-203ENST00000564272 hCG_38984A0A1B0GV85 526 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 FSTL3O95633 263 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 PTBP3O95758 552 aaKnown RBP16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 SLC2A5P22732 501 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 CD80P33681 288 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 DAPP51397 102 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 CRISP1P54107 249 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 GNB2P62879 340 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 FAM3AP98173 230 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 LYPD2Q6UXB3 125 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 OR8B3Q8NGG8 313 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 THEM6Q8WUY1 208 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 DNAJC9Q8WXX5 260 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 C22orf15Q8WYQ4 148 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 PGAM5Q96HS1 289 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 OR8B2Q96RD0 313 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 RNF7Q9UBF6 113 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 AUP1Q9Y679 476 aa16.69■□□□□ 0.26
SHCBP1-203ENST00000564272 ANKRD30BLA7E2S9 258 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 MITFO75030 526 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 APOC1P02654 83 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 GRPP07492 148 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 PITPNBP48739 271 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 HILS1P60008 231 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 APOFQ13790 326 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 ATP6AP1Q15904 470 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 SNAPC1Q16533 368 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 ARMCX4Q5H9R4 360 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 SLC35D3Q5M8T2 416 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 LRRN1Q6UXK5 716 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 ZNF826PQ6ZT77 177 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms