RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DPY30Q9C005 99 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 KLHL14Q9P2G3 628 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 HAO1Q9UJM8 370 aa8.12□□□□□ -1.11
HDGFL3-204ENST00000563790 FAT3Q8TDW7 4589 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF726A6NNF4 738 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 SPAG7O75391 227 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 AHSA1O95433 338 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 NR2F1P10589 423 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 ETFAP13804 333 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 UQCRBP14927 111 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 RAC2P15153 192 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 JUNBP17275 347 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 GRPRP30550 384 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 CHI3L1P36222 383 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 GSK3AP49840 483 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 UFM1P61960 85 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 IKZF1Q13422 519 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 DPY19L1Q2PZI1 675 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 LIN52Q52LA3 116 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 C9orf152Q5JTZ5 239 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 FAM69AQ5T7M9 428 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 TEX36Q5VZQ5 186 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 OGFOD2Q6N063 350 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 TEX38Q6PEX7 206 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 LYG2Q86SG7 212 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 DHDDSQ86SQ9 333 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC30A8Q8IWU4 369 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 MKXQ8IYA7 352 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 PEX5LQ8IYB4 626 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 FAM216BQ8N7L0 139 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 MNS1Q8NEH6 495 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 AKR7LQ8NHP1 331 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 TMEM54Q969K7 222 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 VPS33AQ96AX1 596 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 PPP1R36Q96LQ0 422 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 GLTPQ9NZD2 209 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 LGALS13Q9UHV8 139 aa8.11□□□□□ -1.11
HDGFL3-204ENST00000563790 A0A1W2PQ09 198 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 NDUFB3O43676 98 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 BGLAPP02818 100 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF32P17041 273 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 HOXB9P17482 250 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 CD200P41217 278 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 ENTPD1P49961 510 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 ECH1Q13011 328 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 GNA13Q14344 377 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 GTDC1Q4AE62 458 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 LRRC10Q5BKY1 277 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 ATG16L1Q676U5 607 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 H1FNTQ75WM6 255 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC36A1Q7Z2H8 476 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 TSEN54Q7Z6J9 526 aaKnown RBP8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 LRRC34Q8IZ02 419 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 LSMEM1Q8N8F7 131 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 RNF152Q8N8N0 203 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 EIF1ADQ8N9N8 165 aaKnown RBP8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 PTP4A1Q93096 173 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC35B4Q969S0 331 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 MOGAT1Q96PD6 335 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 CCL13Q99616 98 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 WFDC6Q9BQY6 131 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 C12orf10Q9HB07 376 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 ING3Q9NXR8 418 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
HDGFL3-204ENST00000563790 A0A087WUJ7 227 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 A0A1B0GWA3 101 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 A6NLC8 198 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 TPST2O60704 377 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 OR2F2O95006 317 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 ABHD16AO95870 558 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 BCHEP06276 602 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 S100A3P33764 101 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 SLC9A3P48764 834 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 CLNS1AP54105 237 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 CLRN1P58418 232 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 ELF3P78545 371 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 PSG4Q00888 419 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 CXorf66Q5JRM2 361 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 WDR38Q5JTN6 314 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 Q6ZR54 194 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 OR6S1Q8NH40 331 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 C2CD4CQ8TF44 421 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 TMEM19Q96HH6 336 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 RBM14Q96PK6 669 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 PANX1Q96RD7 426 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 THAP7Q9BT49 309 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 MEAF6Q9HAF1 191 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 CCNB1IP1Q9NPC3 277 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 AIG1Q9NVV5 245 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 ACTR3BQ9P1U1 418 aa8.09□□□□□ -1.11
HDGFL3-204ENST00000563790 NACAE9PAV3 2078 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms