RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 V9GYY9 64 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 C2orf16Q68DN1 1984 aa2.12□□□□□ -2.07
SHCBP1-202ENST00000563219 TRAV8-7A0A075B6U6 113 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 TRAV19A0A0A6YYK7 116 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 IGHV1-69DA0A0B4J2H0 117 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A0J9YXV3 536 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A1W2PP18 115 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC25A14O95258 325 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 SMC2O95347 1197 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 YEATS4O95619 227 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PSG2P11465 335 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF823P16415 610 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 CD70P32970 193 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PFN2P35080 140 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 TALDO1P37837 337 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 CSKP41240 450 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 HERVK_113P61574 105 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 RPL23P62829 140 aaKnown RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC35B1P78383 322 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PRR3P79522 188 aaKnown RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 MPPED2Q15777 294 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 STK11Q15831 433 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF658BQ4V348 819 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 SMUG1Q53HV7 270 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM205Q6UW68 189 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PID1Q7Z2X4 250 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 RBM45Q8IUH3 476 aaKnown RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 CDKL3Q8IVW4 592 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 RIMKLAQ8IXN7 391 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 MKXQ8IYA7 352 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 KRT222Q8N1A0 295 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 Q8N976 141 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 SPERTQ8NA61 448 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 OR8K3Q8NH51 312 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 OR51A7Q8NH64 312 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 ABHD3Q8WU67 409 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 GHSRQ92847 366 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 MRGPRFQ96AM1 343 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 RCN3Q96D15 328 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 NEURL3Q96EH8 262 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 GALNT14Q96FL9 552 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PDXPQ96GD0 296 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 GLT1D1Q96MS3 346 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM175Q9BSA9 504 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 AGMATQ9BSE5 352 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 FRMD8P1Q9BZ68 369 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 PORCNQ9H237 461 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 C12orf10Q9HB07 376 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 TREM1Q9NP99 234 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 MED4Q9NPJ6 270 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 RRAGDQ9NQL2 400 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF282Q9UDV7 671 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 CES1P1Q9UKY3 287 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 WSB1Q9Y6I7 421 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 V9GYY5 206 aaPredicted RBP2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 CDC42BPBQ9Y5S2 1711 aa2.11□□□□□ -2.07
SHCBP1-202ENST00000563219 IGKV6D-21A0A0A0MT36 114 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IGHV5-51A0A0C4DH38 117 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IGHV3-66A0A0C4DH42 116 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 C5orf63A6NC05 138 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 NKX2-6A6NCS4 301 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 MGAT4DA6NG13 374 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF879B4DU55 563 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 SERPINB7O75635 380 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 LCA5LO95447 670 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 APOA1P02647 267 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 GLAP06280 429 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IVLP07476 585 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 RHOCP08134 193 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 THRAP10827 490 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 LIPCP11150 499 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TCN2P20062 427 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OMGP23515 440 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 DTYMKP23919 212 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 MYL9P24844 172 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IVDP26440 423 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 ARL2P36404 184 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 MYCNOSP40205 109 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 GALR1P47211 349 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 BLVRAP53004 296 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 RPL31P62899 125 aaKnown RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 CDK5Q00535 292 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TRDNQ13061 729 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TAL2Q16559 108 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TCEAL5Q5H9L2 206 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 FAM78AQ5JUQ0 283 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 SAXO2Q658L1 398 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 THOC7Q6I9Y2 204 aaKnown RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IGFL2Q6UWQ7 119 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TIFABQ6ZNK6 161 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 NDUFAF7Q7L592 441 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 SNX20Q7Z614 316 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 PCP2Q8IVA1 136 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OR10G4Q8NGN3 311 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OR6K6Q8NGW6 343 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OR52P1PQ8NH57 321 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OR5W2Q8NH69 310 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 LILRB4Q8NHJ6 448 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms