RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 AMMECR1LQ6DCA0 310 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 LCTLQ6UWM7 567 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 FBXW12Q6X9E4 464 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 GPR135Q8IZ08 494 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 IQCF1Q8N6M8 205 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 OR51G2Q8NGK0 314 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 OR1B1Q8NGR6 318 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 BLNKQ8WV28 456 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PBDC1Q9BVG4 233 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SMIM3Q9BZL3 60 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ULBP2Q9BZM5 246 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PLK3Q9H4B4 646 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 APOBEC3GQ9HC16 384 aaKnown RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 GCM1Q9NP62 436 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 MARCH5Q9NX47 278 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 TAS2R8Q9NYW2 309 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 KCNE5Q9UJ90 142 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 FAM157AC9JC47 383 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ZNF19P17023 458 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ELK1P19419 428 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 EDNRBP24530 442 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 MIPP30301 263 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 DNASE1L1P49184 302 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PIGPP57054 158 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 GUCA2AQ02747 115 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PMPCAQ10713 525 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ELOBQ15370 118 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 C2orf68Q2NKX9 166 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ZNF699Q32M78 642 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PSAPL1Q6NUJ1 521 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 C2CD4AQ8NCU7 369 aaPredicted RBP8.39□□□□□ -1.07
CDH1-205ENST00000562836 PLPP5Q8NEB5 264 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 NFKBIDQ8NI38 313 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 KCNG3Q8TAE7 436 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 FNDC9Q8TBE3 224 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 VN1R1Q9GZP7 353 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 ATG5Q9H1Y0 275 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 HEBP1Q9NRV9 189 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 SLC7A10Q9NS82 523 aa8.39□□□□□ -1.07
CDH1-205ENST00000562836 PIKFYVEQ9Y2I7 2098 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 SYT7O43581 403 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 CREBL2O60519 120 aaPredicted RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 SERPINE2P07093 398 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 BPIP17213 487 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 AMTP48728 403 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TTLL9Q3SXZ7 439 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TMEM128Q5BJH2 165 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 SLC25A53Q5H9E4 307 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 ADCK2Q7Z695 626 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 FBXO16Q8IX29 292 aaPredicted RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 SLC30A7Q8NEW0 376 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 OR2T33Q8NG76 320 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 FAM151AQ8WW52 585 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TMEM18Q96B42 140 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 CDCA4Q9BXL8 241 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 LINC00470Q9BZP3 86 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TM7SF3Q9NS93 570 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 BET1LQ9NYM9 111 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 VAX2Q9UIW0 290 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 HCRTR1O43613 425 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 B3GALT2O43825 422 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 DUSP11O75319 330 aaKnown RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 UPK3AO75631 287 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 MPZL1O95297 269 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 GABRA2P47869 451 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TCTN1Q2MV58 587 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 C17orf99Q6UX52 265 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 KCNRGQ8N5I3 272 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 OR5D13Q8NGL4 314 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 OR51F2Q8NH61 342 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 SLC25A43Q8WUT9 341 aaPredicted RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 OR4K3Q96R72 315 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 SRSF8Q9BRL6 282 aaKnown RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 UBTD1Q9HAC8 227 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 TMEM100Q9NV29 134 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 MRPS33Q9Y291 106 aaKnown RBP8.38□□□□□ -1.07
CDH1-205ENST00000562836 ETV7Q9Y603 341 aa8.38□□□□□ -1.07
CDH1-205ENST00000562836 GFRA2O00451 464 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 GRAP2O75791 330 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 TUSC2O75896 110 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 CCKARP32238 428 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 RPS13P62277 151 aaKnown RBP8.37□□□□□ -1.07
CDH1-205ENST00000562836 CDCP2Q5VXM1 449 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 FAM71F2Q6NXP2 309 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 CSNK1A1LQ8N752 337 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 OR11G2Q8NGC1 345 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 OR52B4Q8NGK2 314 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 OR2AE1Q8NHA4 323 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 ZNF480Q8WV37 535 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 MICU1Q9BPX6 476 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 REEP2Q9BRK0 252 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
CDH1-205ENST00000562836 FGF21Q9NSA1 209 aa8.37□□□□□ -1.07
CDH1-205ENST00000562836 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms