RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TBX5Q99593 518 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 BPESC1Q9GZL8 116 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 ZNF275Q9NSD4 429 aaPredicted RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 TMEM100Q9NV29 134 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 IL19Q9UHD0 177 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 ZNF391Q9UJN7 358 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 FLNAP21333 2647 aaKnown RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 hCG_38984A0A1B0GV85 526 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 TMEM269A0A1B0GVZ9 245 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 J3QRE1 110 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 MLNRO43193 412 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 SRSF10O75494 262 aaKnown RBP14.18□□□□□ -0.14
CLK3-207ENST00000562389 DBTP11182 482 aaKnown RBP14.18□□□□□ -0.14
CLK3-207ENST00000562389 DDOSTP39656 456 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 MMP16P51512 607 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 ACTC1P68032 377 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 ACTA1P68133 377 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 FAM3AP98173 230 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 ZNF91Q05481 1191 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 IL18R1Q13478 541 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 BIVMQ86UB2 503 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 OR8B12Q8NGG6 310 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 OR56B2PQ8NGI1 322 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 ADI1Q9BV57 179 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 SLC22A4Q9H015 551 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 MOB1AQ9H8S9 216 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 MRPL15Q9P015 296 aaKnown RBP14.18□□□□□ -0.14
CLK3-207ENST00000562389 MRM2Q9UI43 246 aaKnown RBP14.18□□□□□ -0.14
CLK3-207ENST00000562389 EXOGQ9Y2C4 368 aaKnown RBP14.18□□□□□ -0.14
CLK3-207ENST00000562389 PCDHGB1Q9Y5G3 927 aa14.18□□□□□ -0.14
CLK3-207ENST00000562389 YLPM1P49750 1951 aaKnown RBP14.17□□□□□ -0.14
CLK3-207ENST00000562389 H0YAE9 185 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 CDC14BO60729 498 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 SULT1C4O75897 302 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 CLIC3O95833 236 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 KRT8P05787 483 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 TNFRSF1AP19438 455 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 USF1P22415 310 aaPredicted RBP14.17□□□□□ -0.14
CLK3-207ENST00000562389 CAPGP40121 348 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 TMEM33P57088 247 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 IL5RAQ01344 420 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 ZNF85Q03923 595 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 SPRNQ5BIV9 151 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 ZNF684Q5T5D7 378 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 MAPK1IP1LQ8NDC0 245 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 SETD9Q8NE22 299 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 OR10AD1Q8NGE0 317 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 ITLN1Q8WWA0 313 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 LGALS12Q96DT0 336 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 OR2V2Q96R30 315 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 PBOV1Q9GZY1 135 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 NUFIP1Q9UHK0 495 aaKnown RBP14.17□□□□□ -0.14
CLK3-207ENST00000562389 NOP16Q9Y3C1 178 aaKnown RBP14.17□□□□□ -0.14
CLK3-207ENST00000562389 R4GMQ9 66 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 HSPE1-MOB4S4R3N1 261 aa14.17□□□□□ -0.14
CLK3-207ENST00000562389 DYSFO75923 2080 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 A0A0U1RQV5 110 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 METTL15A6NJ78 407 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 H0YL77 283 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 MAGEB4O15481 346 aaPredicted RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 WBP4O75554 376 aaKnown RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 TACSTD2P09758 323 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 GPR6P46095 362 aaPredicted RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 GSK3AP49840 483 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 MFGE8Q08431 387 aaPredicted RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 OR8B8Q15620 311 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 HFEQ30201 348 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 GFOD2Q3B7J2 385 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 YIPF7Q8N8F6 280 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 NRG4Q8WWG1 115 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 MEGF10Q96KG7 1140 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 LYZL4Q96KX0 146 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 MRPS18AQ9NVS2 196 aaKnown RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 RPL36Q9Y3U8 105 aaKnown RBP14.16□□□□□ -0.14
CLK3-207ENST00000562389 CACNG2Q9Y698 323 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 ACANP16112 2415 aa14.16□□□□□ -0.14
CLK3-207ENST00000562389 IGHV4-61A0A0C4DH41 118 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 LOC110117498-PIK3R3F6TDL0 507 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 H0YJX3 145 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 GMDSO60547 372 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 PNPP00491 289 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 IGLV3-1P01715 115 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 HLA-DPB1P04440 258 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 SRP9P49458 86 aaKnown RBP14.15□□□□□ -0.14
CLK3-207ENST00000562389 ISL1P61371 349 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 RAB40BQ12829 278 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 SNCBQ16143 134 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 PLEKHG7Q6ZR37 379 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 KLBQ86Z14 1044 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 ACBD7Q8N6N7 88 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 CELF2-AS1Q8N7Q2 184 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 CSNK2A3Q8NEV1 391 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 ITFG2Q969R8 447 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 SMR3AQ99954 134 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 ADAT1Q9BUB4 502 aaKnown RBP14.15□□□□□ -0.14
CLK3-207ENST00000562389 AMBNQ9NP70 447 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 G6PC2Q9NQR9 355 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 SNX5Q9Y5X3 404 aa14.15□□□□□ -0.14
CLK3-207ENST00000562389 DAPL1A0PJW8 107 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 ANKRD30BLA7E2S9 258 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms