RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ZNF544Q6NX49 715 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 Q6ZS92 163 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 GDPD3Q7L5L3 318 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 NUFIP2Q7Z417 695 aaKnown RBP5.71□□□□□ -1.5
CAPN3-210ENST00000561817 BIVMQ86UB2 503 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 LRRC28Q86X40 367 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-210ENST00000561817 TUSC5Q8IXB3 177 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 GDPD1Q8N9F7 314 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 BVESQ8NE79 360 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 GJC3Q8NFK1 279 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 OR4M1Q8NGD0 313 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 OR8B12Q8NGG6 310 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 OR2AJ1Q8NGZ0 328 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 UBASH3BQ8TF42 649 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ST8SIA4Q92187 359 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 THRSPQ92748 146 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 EXTL1Q92935 676 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SLC25A38Q96DW6 304 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 COX4I2Q96KJ9 171 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 LYZL4Q96KX0 146 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 CEP19Q96LK0 163 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 TAAR6Q96RI8 345 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SH3GL3Q99963 347 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SOX7Q9BT81 388 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 RBM24Q9BX46 236 aaKnown RBP5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SLCO5A1Q9H2Y9 848 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 MOB1AQ9H8S9 216 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SLC17A5Q9NRA2 495 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ABCB10Q9NRK6 738 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF275Q9NSD4 429 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-210ENST00000561817 FAIMQ9NVQ4 179 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF224Q9NZL3 707 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 CLCF1Q9UBD9 225 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 OR5V1Q9UGF6 321 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 HHLA2Q9UM44 414 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 SPATA2Q9UM82 520 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 FOXJ3Q9UPW0 622 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF175Q9Y473 711 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 V9GY05 133 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 BSNQ9UPA5 3926 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 USP24Q9UPU5 2620 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 CACNA1GO43497 2377 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 MED12LQ86YW9 2145 aa5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ANKRD11Q6UB99 2663 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-210ENST00000561817 ARHGAP21Q5T5U3 1957 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 A0A0G2JMP0 313 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 A0A0X1KG70 313 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 A0A1W2PQ09 198 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 LOC390937A0A1W2PQ73 354 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 H3BSH0 61 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 K7ENP7 123 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 LDLRAD4O15165 306 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 PLA2G10O15496 165 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 TSC22D2O75157 780 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 SYNGR4O95473 234 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OPN1MWP04001 364 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 YES1P07947 543 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OPN1MW2P0DN77 364 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OPN1MW3P0DN78 364 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 CALCBP10092 127 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 AZGP1P25311 298 aaKnown RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 DDOSTP39656 456 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 RFX2P48378 723 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 CX3CR1P49238 355 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 PRKXP51817 358 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 HGFACQ04756 655 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 PLA2G7Q13093 441 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 RAB35Q15286 201 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 RNPS1Q15287 305 aaKnown RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 ADIPOQQ15848 244 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 CEACAM16Q2WEN9 425 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 ELFN2Q5R3F8 820 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 C1orf100Q5SVJ3 147 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 HES5Q5TA89 166 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 INO80CQ6PI98 192 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 CRIP3Q6Q6R5 217 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 FAM131AQ6UXB0 335 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 NAA40Q86UY6 237 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 SKA3Q8IX90 412 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 CMTM4Q8IZR5 234 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 SLC22A24Q8N4F4 322 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 RBMXL3Q8N7X1 1067 aaKnown RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 SAMD12Q8N8I0 201 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 MINDY2Q8NBR6 621 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 DNAAF1Q8NEP3 725 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OR4M2Q8NGB6 313 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OR51A2Q8NGJ7 313 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 OR1J2Q8NGS2 313 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 LGALS14Q8TCE9 139 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 SSC4DQ8WTU2 575 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 ADAT3Q96EY9 351 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 ALKBH3Q96Q83 286 aaPredicted RBP5.7□□□□□ -1.5
CAPN3-210ENST00000561817 ABHD1Q96SE0 405 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 FOXB1Q99853 325 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 WACQ9BTA9 647 aa5.7□□□□□ -1.5
CAPN3-210ENST00000561817 WNT5BQ9H1J7 359 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms