RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 OR5V1Q9UGF6 321 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 NUP50Q9UKX7 468 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 PPIAL4AQ9Y536 164 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 N6AMT1Q9Y5N5 214 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 TMEM89A2RUT3 159 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 FAM183AA6NL82 134 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 ZNF878C9JN71 531 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 H3BN98 237 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 PTBP3O95758 552 aaKnown RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 CFPP27918 469 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 GSTT1P30711 240 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 COMPP49747 757 aaPredicted RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 BLVRAP53004 296 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 GNB2P62879 340 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 ACTG1P63261 375 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 EIF2B1Q14232 305 aaKnown RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 GK3PQ14409 553 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 LRRN1Q6UXK5 716 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 ZNF841Q6ZN19 808 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 DPY19L4Q7Z388 723 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 BCL6BQ8N143 479 aaPredicted RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 SIGLECL1Q8N7X8 197 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 OR8B3Q8NGG8 313 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 OR11L1Q8NGX0 322 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 TEX47Q8TBZ9 253 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 CANT1Q8WVQ1 401 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 GCDHQ92947 438 aaPredicted RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 SPSB4Q96A44 273 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 DACT3Q96B18 629 aaPredicted RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 OTULINQ96BN8 352 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 NEIL1Q96FI4 390 aaPredicted RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 PLEKHA8Q96JA3 519 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 OR8B2Q96RD0 313 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 ADAT1Q9BUB4 502 aaKnown RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 FN3KRPQ9HA64 309 aa8.59□□□□□ -1.03
CLK3-205ENST00000561673 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.03
CLK3-205ENST00000561673 WNK2Q9Y3S1 2297 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 KIR2DS1A0A191URI9 304 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 ARRDC5A6NEK1 342 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 AQP12BA6NM10 295 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 GNGT2O14610 69 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 POU1F1P28069 291 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 GRK5P34947 590 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 SLC15A1P46059 708 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 PITPNBP48739 271 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 CX3CR1P49238 355 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 UBA52P62987 128 aaKnown RBP8.58□□□□□ -1.04
CLK3-205ENST00000561673 GRB2P62993 217 aaKnown RBP8.58□□□□□ -1.04
CLK3-205ENST00000561673 SFRP4Q6FHJ7 346 aaPredicted RBP8.58□□□□□ -1.04
CLK3-205ENST00000561673 BTNL3Q6UXE8 466 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 DCDC5Q6ZRR9 648 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 NLRC3Q7RTR2 1065 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 PRSS45Q7RTY3 260 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 ERI1Q8IV48 349 aaKnown RBP8.58□□□□□ -1.04
CLK3-205ENST00000561673 AQP12AQ8IXF9 295 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 TIGD4Q8IY51 512 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 OR56B2PQ8NGI1 322 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 OR6N2Q8NGY6 317 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 RNF133Q8WVZ7 376 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 SGK3Q96BR1 496 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 INTS14Q96SY0 518 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 ABHD6Q9BV23 337 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 OR51V1Q9H2C8 321 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 OPA3Q9H6K4 179 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 PDP1Q9P0J1 537 aaPredicted RBP8.58□□□□□ -1.04
CLK3-205ENST00000561673 RNF7Q9UBF6 113 aa8.58□□□□□ -1.04
CLK3-205ENST00000561673 IGHV3OR16-10A0A075B7F0 116 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 GYG2O15488 501 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 TBX1O43435 398 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 XRCC2O43543 280 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 GLCEO94923 617 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 ANXA2P07355 339 aaKnown RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 GRPP07492 148 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 PPIAL4GP0DN37 164 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 IGHV4-38-2P0DP08 117 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 PRKACGP22612 351 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 HSD11B1P28845 292 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 PSMB10P40306 273 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 OPRL1P41146 370 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 FAM3AP98173 230 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 GINS1Q14691 196 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 WDR25Q64LD2 544 aaPredicted RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 RBMS3Q6XE24 437 aaKnown RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 ZNF826PQ6ZT77 177 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 DOK3Q7L591 496 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 SHFQ7M4L6 423 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 SLC16A9Q7RTY1 509 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 HS3ST5Q8IZT8 346 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 BOLLQ8N9W6 283 aaKnown RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 SPERTQ8NA61 448 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 ZMYND19Q96E35 227 aaPredicted RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 REEP6Q96HR9 211 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 ZNF48Q96MX3 618 aaPredicted RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 DUX5Q96PT3 197 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms