RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 KLBQ86Z14 1044 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 MUC20Q8N307 709 aaPredicted RBP17.34■□□□□ 0.37
TPM1-232ENST00000561425 TMEM158Q8WZ71 300 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 OTULINQ96BN8 352 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 FAHD2AQ96GK7 314 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 TEAD3Q99594 435 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 TEX12Q9BXU0 123 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 SP140LQ9H930 580 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 TVP23BQ9NYZ1 205 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 ZNF319Q9P2F9 582 aa17.34■□□□□ 0.37
TPM1-232ENST00000561425 A0A0G2JMP0 313 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 A0A0X1KG70 313 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 SELENOFO60613 162 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 ALOX5APP20292 161 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 CA6P23280 308 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 SRP14P37108 136 aaKnown RBP17.33■□□□□ 0.36
TPM1-232ENST00000561425 ACTR3P61158 418 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 FAM3AP98173 230 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 SNAPC1Q16533 368 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 SPATC1Q76KD6 591 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 C10orf67Q8IYJ2 551 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 RFLNBQ8N5W9 214 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 OR4M2Q8NGB6 313 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 OR52H1Q8NGJ2 320 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 UBAP1Q9NZ09 502 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 COL6A5A8TX70 2615 aa17.33■□□□□ 0.36
TPM1-232ENST00000561425 CCDC182A6NF36 153 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 GGT3PA6NGU5 568 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 CYB5R3P00387 301 aaPredicted RBP17.32■□□□□ 0.36
TPM1-232ENST00000561425 LYNP07948 512 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 FCGR1AP12314 374 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 ZNF121P58317 390 aaPredicted RBP17.32■□□□□ 0.36
TPM1-232ENST00000561425 OR8G1Q15617 311 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 KLHL12Q53G59 568 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 SLX4IPQ5VYV7 408 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 SLC16A9Q7RTY1 509 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 TEX29Q8N6K0 151 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 SPERTQ8NA61 448 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 PLEKHA8Q96JA3 519 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 OPN4Q9UHM6 478 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 METRNQ9UJH8 293 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
TPM1-232ENST00000561425 hCG_38984A0A1B0GV85 526 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 LRRC30A6NM36 301 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 ZAR1LA6NP61 321 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 CEACAM18A8MTB9 384 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 RNF212BA8MTL3 300 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 TRAPPC2LH3BP13 241 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 MITFO75030 526 aaPredicted RBP17.31■□□□□ 0.36
TPM1-232ENST00000561425 FSHBP01225 129 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 HSD11B1P28845 292 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 EPHA2P29317 976 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 SEC61A1P61619 476 aaKnown RBP17.31■□□□□ 0.36
TPM1-232ENST00000561425 LCN2P80188 198 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 APOFQ13790 326 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 MPPED2Q15777 294 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 KRTAP24-1Q3LI83 254 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 ZNF404Q494X3 552 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 DCAF12L2Q5VW00 463 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 C12orf73Q69YU5 71 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 AMIGO2Q86SJ2 522 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 ZDHHC13Q8IUH4 622 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 PHC2Q8IXK0 858 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 C1orf87Q8N0U7 546 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 OR56B2PQ8NGI1 322 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 LRTOMTQ8WZ04 291 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 RGCCQ9H4X1 137 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 KIF17Q9P2E2 1029 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 PCDHB10Q9UN67 800 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 MXRA5Q9NR99 2828 aa17.31■□□□□ 0.36
TPM1-232ENST00000561425 IGHV3-64DA0A0J9YX35 117 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 PRKYO43930 277 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 H2BFMP0C1H6 154 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 CFL1P23528 166 aaKnown RBP17.3■□□□□ 0.36
TPM1-232ENST00000561425 PAX2Q02962 417 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 AADACL4Q5VUY2 407 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 DEGS2Q6QHC5 323 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 FAM57BQ71RH2 274 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 KRT74Q7RTS7 529 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 C1QL2Q7Z5L3 287 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 THEM6Q8WUY1 208 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 REEP6Q96HR9 211 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 TMEM246Q9BRR3 403 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 ADAT1Q9BUB4 502 aaKnown RBP17.3■□□□□ 0.36
TPM1-232ENST00000561425 METTL17Q9H7H0 456 aaPredicted RBP17.3■□□□□ 0.36
TPM1-232ENST00000561425 NIPAL2Q9H841 368 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 MMP26Q9NRE1 261 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 KRT84Q9NSB2 600 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 PPIAL4AQ9Y536 164 aa17.3■□□□□ 0.36
TPM1-232ENST00000561425 H0YHG0 523 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 TNFRSF13BO14836 293 aaPredicted RBP17.29■□□□□ 0.36
TPM1-232ENST00000561425 FAM20BO75063 409 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 ANXA2P07355 339 aaKnown RBP17.29■□□□□ 0.36
TPM1-232ENST00000561425 ZNF12P17014 697 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 NAA10P41227 235 aaPredicted RBP17.29■□□□□ 0.36
TPM1-232ENST00000561425 OR8B8Q15620 311 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 TUSC1Q2TAM9 212 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 FAM201AQ5SY85 155 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 PRAMEF6Q5VXH4 476 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms