RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 RCN1Q15293 331 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 ZNF771Q7L3S4 317 aaPredicted RBP16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 ASB17Q8WXJ9 295 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 RAB1CQ92928 201 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 DVL3Q92997 716 aaPredicted RBP16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 SPSB4Q96A44 273 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 SGK3Q96BR1 496 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 TIMD4Q96H15 378 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 OR8B4Q96RC9 309 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 TBX5Q99593 518 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 ADAT1Q9BUB4 502 aaKnown RBP16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 NIPAL2Q9H841 368 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 TMEM106BQ9NUM4 274 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 HAO2Q9NYQ3 351 aa16.84■□□□□ 0.29
TSPAN3-210ENST00000561277 SONP18583 2426 aaKnown RBP16.83■□□□□ 0.29
TSPAN3-210ENST00000561277 ISPDA4D126 451 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 A8MV72 311 aaPredicted RBP16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF670-ZNF695F2Z2N8 137 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 OR8G1Q15617 311 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 LRRC36Q1X8D7 754 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF322Q6U7Q0 402 aaPredicted RBP16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF420Q8TAQ5 688 aaPredicted RBP16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 HPS1Q92902 700 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 RFKQ969G6 155 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 CLN6Q9NWW5 311 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 GMPPBQ9Y5P6 360 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 ABCA2Q9BZC7 2435 aa16.83■□□□□ 0.28
TSPAN3-210ENST00000561277 DYSFO75923 2080 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 hCG_38984A0A1B0GV85 526 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 MAGEB4O15481 346 aaPredicted RBP16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 ATP6V1E1P36543 226 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 MMP16P51512 607 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 RIDAP52758 137 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 FAM3AP98173 230 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 DEGS2Q6QHC5 323 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 PEG10Q86TG7 708 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF679Q8IYX0 411 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 TRUB1Q8WWH5 349 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 MNTQ99583 582 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 GCM1Q9NP62 436 aa16.82■□□□□ 0.28
TSPAN3-210ENST00000561277 A0A1B0GWJ7 208 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 PHYHO14832 338 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ENTPD6O75354 484 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 TGFAP01135 160 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ANPEPP15144 967 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 HOXB4P17483 251 aaPredicted RBP16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 CFL1P23528 166 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ROM1Q03395 351 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 POU4F2Q12837 409 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 MAB21L1Q13394 359 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 MOGAT3Q86VF5 341 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 OR8B12Q8NGG6 310 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 GAL3ST1Q99999 423 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 MRPL15Q9P015 296 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 AASSQ9UDR5 926 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 TMEM269A0A1B0GVZ9 245 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ERICH4A6NGS2 130 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 E9PQ18 207 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF254O75437 659 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 PRAMEF6Q5VXH4 476 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 FAM166AQ6J272 317 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 PLEKHG7Q6ZR37 379 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 SSX6Q7RTT6 188 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 OR10H4Q8NGA5 316 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 APOL4Q9BPW4 351 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 SLC22A4Q9H015 551 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 RGCCQ9H4X1 137 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 LPAR2Q9HBW0 351 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 FAM206AQ9NX38 181 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 NOP16Q9Y3C1 178 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 NPTNQ9Y639 398 aa16.81■□□□□ 0.28
TSPAN3-210ENST00000561277 ANKRD30BLA7E2S9 258 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 FAM157AC9JC47 383 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 DDOSTP39656 456 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 GSK3AP49840 483 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 CDH15P55291 814 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF829Q3KNS6 432 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 LPCAT4Q643R3 524 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 LINC01356Q8N9X3 169 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 ZNF665Q9H7R5 613 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 SMPD3Q9NY59 655 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 UBAP1Q9NZ09 502 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 KCNS2Q9ULS6 477 aa16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 ANK3Q12955 4377 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-210ENST00000561277 LOC100130705A0A1B0GUX0 176 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 A0A1W2PQL4 384 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 GMDSO60547 372 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 CYB5R3P00387 301 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 PEX2P28328 305 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 LMO4P61968 165 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 SNRPGP62308 76 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 MFGE8Q08431 387 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 MALRD1Q5VYJ5 2156 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 COMMD2Q86X83 199 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 LYZL4Q96KX0 146 aa16.79■□□□□ 0.28
TSPAN3-210ENST00000561277 SIGLEC11Q96RL6 698 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms