RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PPP1R35Q8TAP8 253 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 RAB18Q9NP72 206 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 PNRC2Q9NPJ4 139 aaKnown RBP15.17■□□□□ 0.02
TPM1-226ENST00000560959 SIRT7Q9NRC8 400 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 C14orf119Q9NWQ9 140 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 CYB5R1Q9UHQ9 305 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 B9D1Q9UPM9 204 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 FOXJ3Q9UPW0 622 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 IER3IP1Q9Y5U9 82 aa15.17■□□□□ 0.02
TPM1-226ENST00000560959 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.16■□□□□ 0.02
TPM1-226ENST00000560959 MEIOCA2RUB1 952 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 FAM220BPB1ANY3 271 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 SOCS2O14508 198 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 GRPP07492 148 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 GRK5P34947 590 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 SAA4P35542 130 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 GGT2P36268 569 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 CENPAP49450 140 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 AANATQ16613 207 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 ZNF826PQ6ZT77 177 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 OR4C13Q8NGP0 309 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 OR2AJ1Q8NGZ0 328 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 OR2T6Q8NHC8 308 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 C12orf43Q96C57 262 aaKnown RBP15.16■□□□□ 0.02
TPM1-226ENST00000560959 TSSK2Q96PF2 358 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 DCTN5Q9BTE1 182 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 SIGLEC9Q9Y336 463 aa15.16■□□□□ 0.02
TPM1-226ENST00000560959 hCG_1807616A0A1W2PRN6 198 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 GGT3PA6NGU5 568 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 A6NLC8 198 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 M0R135 149 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 ZNF92Q03936 586 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 DBPQ10586 325 aaPredicted RBP15.15■□□□□ 0.02
TPM1-226ENST00000560959 ATPAF1Q5TC12 328 aaPredicted RBP15.15■□□□□ 0.02
TPM1-226ENST00000560959 NCR3LG1Q68D85 454 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 OR6V1Q8N148 313 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 KLHDC1Q8N7A1 406 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 OR2T12Q8NG77 320 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 ZNF799Q96GE5 643 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 CCL13Q99616 98 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 OPA3Q9H6K4 179 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 MRGBPQ9NV56 204 aa15.15■□□□□ 0.02
TPM1-226ENST00000560959 M0R1W7 72 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 BHLHE40O14503 412 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 NDUFB3O43676 98 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 DDOSTP39656 456 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 TGM4P49221 684 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 POU4F2Q12837 409 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 WDR38Q5JTN6 314 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 CRIP3Q6Q6R5 217 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 VTCN1Q7Z7D3 282 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.14■□□□□ 0.01
TPM1-226ENST00000560959 ZBTB46Q86UZ6 589 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 C11orf53Q8IXP5 236 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 C11orf44Q8N8P7 122 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 SLC7A13Q8TCU3 470 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 SPTSSAQ969W0 71 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 FAM46AQ96IP4 442 aaKnown RBP15.14■□□□□ 0.01
TPM1-226ENST00000560959 SIKE1Q9BRV8 207 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 MEGF9Q9H1U4 602 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 SRA1Q9HD15 236 aaKnown RBP15.14■□□□□ 0.01
TPM1-226ENST00000560959 KCNG2Q9UJ96 466 aa15.14■□□□□ 0.01
TPM1-226ENST00000560959 IGHV3OR15-7A0A075B7D8 119 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 H3BUX3 64 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 OTX1P32242 354 aaPredicted RBP15.13■□□□□ 0.01
TPM1-226ENST00000560959 FXYD6P3P58550 94 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 PCK2Q16822 640 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 RFX4Q33E94 735 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 LRRC10Q5BKY1 277 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 AGBL2Q5U5Z8 902 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 LINC00346Q8IVM7 164 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 FGFRL1Q8N441 504 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 OR4F17Q8NGA8 305 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 PHF21AQ96BD5 680 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 OR4F4Q96R69 305 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 SSX3Q99909 188 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
TPM1-226ENST00000560959 METTL8Q9H825 291 aaKnown RBP15.13■□□□□ 0.01
TPM1-226ENST00000560959 A0A1B0GW55 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 A0A1W2PRQ8 180 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 BBIP1A8MTZ0 92 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 ARPC3O15145 178 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L2P0CJ85 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L3P0CJ86 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L4P0CJ87 422 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L5P0CJ88 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L6P0CJ89 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L7P0CJ90 424 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 OMPP47874 163 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DGCR6Q14129 220 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 SNAI3Q3KNW1 292 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 IFI44LQ53G44 452 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 PGBD2Q6P3X8 592 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4L9Q6RFH8 374 aaPredicted RBP15.12■□□□□ 0.01
TPM1-226ENST00000560959 DRAM2Q6UX65 266 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 LIAT1Q6ZQX7 453 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 CYP4Z1Q86W10 505 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 CLPTM1LQ96KA5 538 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 GID8Q9NWU2 228 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 DUX4Q9UBX2 424 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms