RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 MROQ9BYG7 248 aa13.14□□□□□ -0.31
RABGGTA-219ENST00000560871 SP140LQ9H930 580 aa13.14□□□□□ -0.31
RABGGTA-219ENST00000560871 RNPEPL1Q9HAU8 725 aa13.14□□□□□ -0.31
RABGGTA-219ENST00000560871 BRD7Q9NPI1 651 aa13.14□□□□□ -0.31
RABGGTA-219ENST00000560871 MRM2Q9UI43 246 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-219ENST00000560871 MAGEB4O15481 346 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 CRLF1O75462 422 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 CLIC3O95833 236 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 RIDAP52758 137 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 ADARB1P78563 741 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 FAM3AP98173 230 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF684Q5T5D7 378 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF555Q8NEP9 628 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 OR2Z1Q8NG97 314 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 OR56B2PQ8NGI1 322 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 OR13G1Q8NGZ3 307 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 NRG4Q8WWG1 115 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 RNFT2Q96EX2 444 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 TBX5Q99593 518 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF275Q9NSD4 429 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 N6AMT1Q9Y5N5 214 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 NAV3Q8IVL0 2385 aa13.13□□□□□ -0.31
RABGGTA-219ENST00000560871 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 IGHV1-69-2A0A0G2JMI3 117 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 A0A1W2PQL4 384 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 H0YL77 283 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 CDC14BO60729 498 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 MMP16P51512 607 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF85Q03923 595 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 OR8B8Q15620 311 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 TTC23Q5W5X9 447 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 OR10H4Q8NGA5 316 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 ITLN1Q8WWA0 313 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 LYZL4Q96KX0 146 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 OR2V2Q96R30 315 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 APOL4Q9BPW4 351 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 ADI1Q9BV57 179 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 RGCCQ9H4X1 137 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 HIVEP2P31629 2446 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 CSPG4Q6UVK1 2322 aa13.12□□□□□ -0.31
RABGGTA-219ENST00000560871 TMEM269A0A1B0GVZ9 245 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 GGT3PA6NGU5 568 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 ACOD1A6NK06 481 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 WBP4O75554 376 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 PNPP00491 289 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TACSTD2P09758 323 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 USF1P22415 310 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TNFSF4P23510 183 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 ISL1P61371 349 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 IL5RAQ01344 420 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 HNRNPA0Q13151 305 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 GFOD2Q3B7J2 385 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 PLEKHG7Q6ZR37 379 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 LGALS12Q96DT0 336 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 MEGF10Q96KG7 1140 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 Q96MT0 163 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 SOX7Q9BT81 388 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TMEM100Q9NV29 134 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 R4GMQ9 66 aa13.11□□□□□ -0.31
RABGGTA-219ENST00000560871 TLN2Q9Y4G6 2542 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ABCA1O95477 2261 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 A0A0U1RQV5 110 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 H0YAE9 185 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 HLA-DPB1P04440 258 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 KRT8P05787 483 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ACKR3P25106 362 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 ATP6V1E1P36543 226 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 DDOSTP39656 456 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 CAPGP40121 348 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 CD200P41217 278 aa13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-219ENST00000560871 GSK3AP49840 483 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms