RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 SPRYD4Q8WW59 207 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 OSBPL10Q9BXB5 764 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 MRPL15Q9P015 296 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 OAZ3Q9UMX2 235 aa12.77□□□□□ -0.37
SNRPA1-210ENST00000560383 H3BNX3 289 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 EBAG9O00559 213 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 HLA-DPB1P04440 258 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 HSD11B1P28845 292 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 NAA10P41227 235 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 RAD23AP54725 363 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF121P58317 390 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 BTG1P62324 171 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 ZMYND11Q15326 602 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 SLC16A9Q7RTY1 509 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 OR52H1Q8NGJ2 320 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 Q8TCH9 128 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 PYDC1Q8WXC3 89 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 CIB1Q99828 191 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 GAL3ST1Q99999 423 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 GABARAPL3Q9BY60 117 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 SEMA6AQ9H2E6 1030 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 METTL17Q9H7H0 456 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 NIPAL2Q9H841 368 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 LPAR2Q9HBW0 351 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 G6PC2Q9NQR9 355 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
SNRPA1-210ENST00000560383 GGT3PA6NGU5 568 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 PLPP2O43688 288 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 GMDSO60547 372 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 H2BFMP0C1H6 154 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 CFL1P23528 166 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 CPT2P23786 658 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 PMELP40967 661 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 FAM3AP98173 230 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 LCN1P1Q5VSP4 162 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 ZFP1Q6P2D0 407 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 DEGS2Q6QHC5 323 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 KLBQ86Z14 1044 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 PLPP7Q8NBV4 271 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 OR56B2PQ8NGI1 322 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 TMEM163Q8TC26 289 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 THEM6Q8WUY1 208 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 RGCCQ9H4X1 137 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF319Q9P2F9 582 aa12.75□□□□□ -0.37
SNRPA1-210ENST00000560383 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 A0A0G2JMP0 313 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 A0A0X1KG70 313 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 ISPDA4D126 451 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 J3QLI3 93 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 ANXA2P07355 339 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 SBK2P0C263 348 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 CA6P23280 308 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 GATA3P23771 443 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 MDH2P40926 338 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 PSMA6P60900 246 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 ROM1Q03395 351 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 OR8G1Q15617 311 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 NXNL2Q5VZ03 156 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 USP43Q70EL4 1123 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 FAM57BQ71RH2 274 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 MEPCEQ7L2J0 689 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 MOGAT3Q86VF5 341 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 MUC20Q8N307 709 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 KLHL36Q8N4N3 616 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 OR4M2Q8NGB6 313 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF420Q8TAQ5 688 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 PKP2Q99959 881 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 OR10A2Q9H208 303 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 PATZ1Q9HBE1 687 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 HAO2Q9NYQ3 351 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 LAMP5Q9UJQ1 280 aa12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 POLR3KQ9Y2Y1 108 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-210ENST00000560383 PPIAL4EA0A075B759 164 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 PPIAL4CA0A0B4J2A2 164 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 SLC22A31A6NKX4 558 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 LRRC30A6NM36 301 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 F5H0A9 414 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 PPIAL4DF5H284 164 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 TBX1O43435 398 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 PPIAL4FP0DN26 164 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 DCTDP32321 178 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 HCCSP53701 268 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 TIGD6Q17RP2 521 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms