RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PGAM5Q96HS1 289 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 ADAT1Q9BUB4 502 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 TOR3AQ9H497 397 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 UFSP2Q9NUQ7 469 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 CDC42EP3Q9UKI2 254 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
RABGGTA-211ENST00000559850 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 TMEM178BH3BS89 294 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 EI24O14681 340 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 DVL1P1P54792 670 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 FAM3AP98173 230 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 MPPED2Q15777 294 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 ZIK1Q3SY52 487 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 MEPCEQ7L2J0 689 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 KRT77Q7Z794 578 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 GLCCI1Q86VQ1 547 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 C19orf18Q8NEA5 215 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 UBE2FQ969M7 185 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 TMEM186Q96B77 213 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 GABARAPL3Q9BY60 117 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 PRRG3Q9BZD7 231 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 HIF1ANQ9NWT6 349 aa12.49□□□□□ -0.41
RABGGTA-211ENST00000559850 XRCC2O43543 280 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 PLPP2O43688 288 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 APOL3O95236 402 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 SEC61A1P61619 476 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 BTG1P62324 171 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 LCN2P80188 198 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 ZFP1Q6P2D0 407 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 OR8B12Q8NGG6 310 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 OR51F2Q8NH61 342 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 SPSB4Q96A44 273 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 CNN2Q99439 309 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 RBM4BQ9BQ04 359 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 OR10A2Q9H208 303 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 ADGRL4Q9HBW9 690 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 S100A14Q9HCY8 104 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 H2AFY2Q9P0M6 372 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 CUBNO60494 3623 aa12.48□□□□□ -0.41
RABGGTA-211ENST00000559850 JMJD1CQ15652 2540 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 hCG_38984A0A1B0GV85 526 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 FAM20BO75063 409 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 GRPP07492 148 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 SRD5A1P18405 259 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 CD200P41217 278 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 GSK3AP49840 483 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 RAD23AP54725 363 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 SRSF2Q01130 221 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 PLEKHG7Q6ZR37 379 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC35F2Q8IXU6 374 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 CBR4Q8N4T8 237 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 BOLLQ8N9W6 283 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 PPP1R14AQ96A00 147 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 LYZL4Q96KX0 146 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 TBX5Q99593 518 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 LPAR3Q9UBY5 353 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 PCDHB10Q9UN67 800 aa12.47□□□□□ -0.41
RABGGTA-211ENST00000559850 APOC1P02654 83 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 ALPLP05186 524 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 HNF1AP20823 631 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 MFGE8Q08431 387 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 ZNF826PQ6ZT77 177 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 LRRC28Q86X40 367 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 OR51G2Q8NGK0 314 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 FAM81AQ8TBF8 368 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 RAB3IPQ96QF0 476 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 OR8B4Q96RC9 309 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 SP140LQ9H930 580 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 MRPL15Q9P015 296 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 AASSQ9UDR5 926 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 ENOPH1Q9UHY7 261 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 RHBDD3Q9Y3P4 386 aa12.46□□□□□ -0.41
RABGGTA-211ENST00000559850 SLC22A31A6NKX4 558 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 ANKRD30BLA7E2S9 258 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 GMDSO60547 372 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 AVPP01185 164 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 ACKR3P25106 362 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 CD80P33681 288 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 SRP14P37108 136 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 CXCR4P61073 352 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 WDR86Q86TI4 376 aa12.45□□□□□ -0.42
RABGGTA-211ENST00000559850 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms