RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 HACD2Q6Y1H2 254 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 BTN2A1Q7KYR7 527 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 LDLRAD3Q86YD5 345 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 FANK1Q8TC84 345 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 C7orf34Q96L11 122 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 DHRS1Q96LJ7 313 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 ADAT1Q9BUB4 502 aaKnown RBP7.59□□□□□ -1.19
HDDC3-204ENST00000559834 SIRPDQ9H106 197 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 OR52D1Q9H346 318 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 OPA3Q9H6K4 179 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 PNRC2Q9NPJ4 139 aaKnown RBP7.59□□□□□ -1.19
HDDC3-204ENST00000559834 DCAF13Q9NV06 445 aaKnown RBP7.59□□□□□ -1.19
HDDC3-204ENST00000559834 ZNF446Q9NWS9 450 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 C1orf123Q9NWV4 160 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 KAAG1Q9UBP8 84 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 KPTNQ9Y664 436 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 WNK1Q9H4A3 2382 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 A0A1B0GVI7 797 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 OR6C68A6NDL8 312 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 SLC22A31A6NKX4 558 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 ANKRD30BLA7E2S9 258 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 DVL1O14640 695 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 GPR37O15354 613 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 OR10H3O60404 316 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 LHBP01229 141 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 IGHV4-59P01825 116 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 MUC1P15941 1255 aaPredicted RBP7.58□□□□□ -1.2
HDDC3-204ENST00000559834 EEF1B2P24534 225 aaKnown RBP7.58□□□□□ -1.2
HDDC3-204ENST00000559834 NUDT2P50583 147 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 TAF13Q15543 124 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 MICBQ29980 383 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 CDONQ4KMG0 1287 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 CGB2Q6NT52 195 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 C8orf82Q6P1X6 216 aaPredicted RBP7.58□□□□□ -1.2
HDDC3-204ENST00000559834 RHOUQ7L0Q8 258 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 CMTM4Q8IZR5 234 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 ZSCAN4Q8NAM6 433 aaPredicted RBP7.58□□□□□ -1.2
HDDC3-204ENST00000559834 OR2T4Q8NH00 348 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 OR8S1Q8NH09 359 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 GNPDA2Q8TDQ7 276 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 MCUR1Q96AQ8 359 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 MAP6Q96JE9 813 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 SP140LQ9H930 580 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 RNPEPL1Q9HAU8 725 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
HDDC3-204ENST00000559834 A0A0U1RQK1 487 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 XRCC2O43543 280 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 DIRAS1O95057 198 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 FBP1P09467 338 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 OTX1P32242 354 aaPredicted RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 TGFBR2P37173 567 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 NAA10P41227 235 aaPredicted RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SLC15A1P46059 708 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 PROK1P58294 105 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 PSME3P61289 254 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SPIBQ01892 262 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 GUCA2AQ02747 115 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SNAI3Q3KNW1 292 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 GLYATL3Q5SZD4 288 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SLC35F1Q5T1Q4 408 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 TEX36Q5VZQ5 186 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 DHRS7BQ6IAN0 325 aaPredicted RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 RPL13AP3Q6NVV1 102 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 METAP1DQ6UB28 335 aaPredicted RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 ZNF826PQ6ZT77 177 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SLC36A1Q7Z2H8 476 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 FAM90A1Q86YD7 464 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 GCSAMQ8N6F7 178 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SDR9C7Q8NEX9 313 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 PROKR2Q8NFJ6 384 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 OR52L1Q8NGH7 329 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 OR2AE1Q8NHA4 323 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 ST8SIA4Q92187 359 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 CMTM5Q96DZ9 223 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 PYURFQ96I23 114 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 KCNJ15Q99712 375 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 PKP2Q99959 881 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 FUZQ9BT04 418 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 COPS4Q9BT78 406 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 C16orf95Q9H693 158 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 GORASP2Q9H8Y8 452 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 SPAG4Q9NPE6 437 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 CENPMQ9NSP4 180 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 MRPL22Q9NWU5 206 aaKnown RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 ADA2Q9NZK5 511 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 ABCD2Q9UBJ2 740 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 RPUSD1Q9UJJ7 312 aaKnown RBP7.57□□□□□ -1.2
HDDC3-204ENST00000559834 N6AMT1Q9Y5N5 214 aa7.57□□□□□ -1.2
HDDC3-204ENST00000559834 MEGF8Q7Z7M0 2845 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 NDUFB3O43676 98 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 TIPRLO75663 272 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 TSPAN9O75954 239 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 KRT36O76013 467 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 APOC1P02654 83 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
HDDC3-204ENST00000559834 FMO3P31513 532 aa7.56□□□□□ -1.2
HDDC3-204ENST00000559834 PYCR1P32322 319 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms