RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
RABGGTA-206ENST00000558649 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.44□□□□□ -0.26
RABGGTA-206ENST00000558649 TEP1Q99973 2627 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 TMEM269A0A1B0GVZ9 245 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 A0A1W2PQL4 384 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 CLDN25C9JDP6 229 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 TNFRSF1AP19438 455 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 MTNR1AP48039 350 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 CHN2P52757 468 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 KRTAP1-1Q07627 177 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 OR8G1Q15617 311 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 MEDAGQ5VYS4 303 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 SSX6Q7RTT6 188 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 COMMD2Q86X83 199 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 OR8B12Q8NGG6 310 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 MNTQ99583 582 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 ADAT1Q9BUB4 502 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 IL19Q9UHD0 177 aa13.43□□□□□ -0.26
RABGGTA-206ENST00000558649 DLGAP1O14490 977 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 WNT9BO14905 357 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 RPP14O95059 124 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 CLIC3O95833 236 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF16P17020 682 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 IL2RGP31785 369 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 SRP9P49458 86 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 TMEM33P57088 247 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 FAM3AP98173 230 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 ROM1Q03395 351 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 TMED1Q13445 227 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 OCLNQ16625 522 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF829Q3KNS6 432 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 YIPF7Q8N8F6 280 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 MEGF10Q96KG7 1140 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 RDH12Q96NR8 316 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 DCLRE1BQ9H816 532 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 FAM206AQ9NX38 181 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 NKX1-2Q9UD57 310 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
RABGGTA-206ENST00000558649 DYSFO75923 2080 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 hCG_38984A0A1B0GV85 526 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 ISPDA4D126 451 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 SNTNA6NMZ2 147 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 ANKRD30BLA7E2S9 258 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 SLC16A6O15403 523 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 MPZL2O60487 215 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF254O75437 659 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 KRT8P05787 483 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 OR2T7P0C7T2 308 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 IGHV4-31P0DP07 118 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 GABRB1P18505 474 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 CFL1P23528 166 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 GSK3AP49840 483 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 IL5RAQ01344 420 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 EGR3Q06889 387 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 SLC25A30Q5SVS4 291 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 OGFRL1Q5TC84 451 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 DEGS2Q6QHC5 323 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 OR2T27Q8NH04 317 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF420Q8TAQ5 688 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 TIMD4Q96H15 378 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 LYZL4Q96KX0 146 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 PBOV1Q9GZY1 135 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 AMBNQ9NP70 447 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 MRM2Q9UI43 246 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 WIPI2Q9Y4P8 454 aa13.41□□□□□ -0.26
RABGGTA-206ENST00000558649 LOC110117498-PIK3R3F6TDL0 507 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 H0YHG0 523 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 CD5LO43866 347 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 TACSTD2P09758 323 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 MMP16P51512 607 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 ZNF91Q05481 1191 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 BCL2L15Q5TBC7 163 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 PRAMEF6Q5VXH4 476 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 MOGAT3Q86VF5 341 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 CLDND2Q8NHS1 167 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 RHOXF1Q8NHV9 184 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 RAB1CQ92928 201 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 PPP1R14AQ96A00 147 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 Q96MT0 163 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 SOX7Q9BT81 388 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 PAPOLGQ9BWT3 736 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 RGCCQ9H4X1 137 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 GCM1Q9NP62 436 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 YAE1D1Q9NRH1 226 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 TMEM106BQ9NUM4 274 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 UFSP2Q9NUQ7 469 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 GNG8Q9UK08 70 aa13.4□□□□□ -0.26
RABGGTA-206ENST00000558649 YLPM1P49750 1951 aaKnown RBP13.4□□□□□ -0.27
RABGGTA-206ENST00000558649 DAPL1A0PJW8 107 aa13.39□□□□□ -0.27
RABGGTA-206ENST00000558649 CASQ2O14958 399 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-206ENST00000558649 PNPP00491 289 aa13.39□□□□□ -0.27
RABGGTA-206ENST00000558649 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-206ENST00000558649 DCTDP32321 178 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms