RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PYCR1P32322 319 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 RPL4P36578 427 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 MPV17P39210 176 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 ALDH3B1P43353 468 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 GSSP48637 474 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 HCCSP53701 268 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 P2RX3P56373 397 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SPIBQ01892 262 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TGFBR3Q03167 851 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 GLO1Q04760 184 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CD47Q08722 323 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 BNIP1Q12981 228 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SNTB2Q13425 540 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 DGCR6Q14129 220 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TRIP10Q15642 601 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TWIST1Q15672 202 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 RFX4Q33E94 735 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PABPC1L2AQ5JQF8 200 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SAMD4BQ5PRF9 694 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 CLEC12AQ5QGZ9 265 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 THEM4Q5T1C6 240 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 C10orf128Q5T292 105 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 TMEM236Q5W0B7 351 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 C1orf94Q6P1W5 598 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CORO6Q6QEF8 472 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 C5orf46Q6UWT4 87 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SLC16A14Q7RTX9 510 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PIWIL3Q7Z3Z3 882 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 ARPINQ7Z6K5 226 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 DHFR2Q86XF0 187 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 LINC00346Q8IVM7 164 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 ZNF101Q8IZC7 436 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 RNF113BQ8IZP6 322 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 FAM185AQ8N0U4 392 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 OR6V1Q8N148 313 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 IQCF1Q8N6M8 205 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 ARIH2OSQ8N7S6 290 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CYB561A3Q8NBI2 242 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 NOXO1Q8NFA2 376 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 OR52E2Q8NGJ4 325 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 MAGEE2Q8TD90 523 aaPredicted RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 RASSF5Q8WWW0 418 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 C11orf40Q8WZ69 217 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 LZICQ8WZA0 190 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PTP4A1Q93096 173 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 YIPF5Q969M3 257 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CCDC124Q96CT7 223 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 RSRC1Q96IZ7 334 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 C18orf12Q96KH6 178 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 POM121L2Q96KW2 1035 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 ERMAPQ96PL5 475 aaPredicted RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 NMNAT3Q96T66 252 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PIP5K1AQ99755 562 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CHID1Q9BWS9 393 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 REG4Q9BYZ8 158 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 SLC19A3Q9BZV2 496 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 OR52D1Q9H346 318 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PPP1R3EQ9H7J1 279 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 EVA1AQ9H8M9 152 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 RNF121Q9H920 327 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 NGBQ9NPG2 151 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CA10Q9NS85 328 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CBLN4Q9NTU7 201 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 MRPL22Q9NWU5 206 aaKnown RBP3.6□□□□□ -1.83
SPG11-211ENST00000558561 ACTR3BQ9P1U1 418 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 RPS6KA6Q9UK32 745 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 POU2F3Q9UKI9 436 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 PRDM4Q9UKN5 801 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 B9D1Q9UPM9 204 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 POMPQ9Y244 141 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 STARD10Q9Y365 291 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 LYVE1Q9Y5Y7 322 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 CACNG2Q9Y698 323 aa3.6□□□□□ -1.83
SPG11-211ENST00000558561 WNK2Q9Y3S1 2297 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IGLV1-36A0A0B4J1U3 117 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IGHV4-61A0A0C4DH41 118 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IGHV3-64DA0A0J9YX35 117 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 PRSS37A4D1T9 235 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FAM183AA6NL82 134 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FAM157AC9JC47 383 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 INAFM1C9JVW0 142 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 H0YL77 283 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 TNFRSF11BO00300 401 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 RER1O15258 196 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SLC25A17O43808 307 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 OR10H3O60404 316 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 MITFO75030 526 aaPredicted RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 TIPRLO75663 272 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 NDUFB2O95178 105 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SOX14O95416 240 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IGHG1P01857 330 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IGHMP01871 453 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SERPINA5P05154 406 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FABP3P05413 133 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 OR8G3PP0DMU2 310 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SELEP16581 610 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 CALB2P22676 271 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 ARR3P36575 388 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 POLR2IP36954 125 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 MAGEA2P43356 314 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms