RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ZIC3O60481 467 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 TSC22D2O75157 780 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 IGLV3-1P01715 115 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 PDGFAP04085 211 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 P04436 131 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 AMY2AP04746 511 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 IFNA6P05013 189 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 OR4E1P0C645 316 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 VSIG10L2P0DP72 767 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 PRF1P14222 555 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CALCRP30988 508 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 ECI1P42126 302 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CX3CR1P49238 355 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CLDN17P56750 224 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 ZNF121P58317 390 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 RAC3P60763 192 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 SEC61A1P61619 476 aaKnown RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 S100A12P80511 92 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 MRPS34P82930 218 aaKnown RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 SIGLEC14Q08ET2 396 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 OPCMLQ14982 345 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 NRN1LQ496H8 165 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CDNFQ49AH0 187 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 C4orf46Q504U0 113 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 PDSS1Q5T2R2 415 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 ZNF468Q5VIY5 522 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 LCN10Q6JVE6 187 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CORO6Q6QEF8 472 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 DBX2Q6ZNG2 339 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CFAP77Q6ZQR2 320 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 CHMP1BQ7LBR1 199 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 ANGPTL5Q86XS5 388 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 MAML2Q8IZL2 1156 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 BPIFB2Q8N4F0 458 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 C12orf45Q8N5I9 185 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 STEAP2Q8NFT2 490 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 OR4D6Q8NGJ1 314 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 OR10S1Q8NGN2 331 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 GCDHQ92947 438 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 PPP1R14AQ96A00 147 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 LOXL4Q96JB6 756 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 NPAS1Q99742 590 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 EMC6Q9BV81 110 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 B3GNT4Q9C0J1 378 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 PPA2Q9H2U2 334 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 PNRC2Q9NPJ4 139 aaKnown RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 IFT46Q9NQC8 304 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
SPG11-209ENST00000558253 OPN4Q9UHM6 478 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 ANAPC10Q9UM13 185 aa7.35□□□□□ -1.23
SPG11-209ENST00000558253 CPAMD8Q8IZJ3 1885 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 BRWD1Q9NSI6 2320 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 A0A0B4J2A0 478 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RFPL4AA6NLU0 287 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 LEUTXA8MZ59 168 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RFPL4AL1F8VTS6 287 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 DHHO43323 396 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RAD1O60671 282 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 KDM4BO94953 1096 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 CD8AP01732 235 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 SERPINA7P05543 415 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 FCER2P06734 321 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 CST2P09228 141 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RPA2P15927 270 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 S100A11P31949 105 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 SFTPDP35247 375 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 PCBD1P61457 104 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 PLA2G7Q13093 441 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 TSC22D1Q15714 1073 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 GFOD2Q3B7J2 385 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 TRIM61Q5EBN2 209 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 VAX1Q5SQQ9 334 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RIPPLY2Q5TAB7 128 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 FAM27BQ5VT28 67 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RAET1LQ5VY80 246 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 AWAT2Q6E213 333 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 C11orf88Q6PI97 169 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 DRAM2Q6UX65 266 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 C3P1Q6ZMU1 363 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ABHD12BQ7Z5M8 362 aaPredicted RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 TRAPPC6BQ86SZ2 158 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 NAA40Q86UY6 237 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 SLC25A42Q86VD7 318 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 TMEM17Q86X19 198 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 LURAP1LQ8IV03 231 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 C20orf196Q8IYI0 205 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR8H3Q8N146 312 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 MUC20Q8N307 709 aaPredicted RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 ARRDC1Q8N5I2 433 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ZNF283Q8N7M2 679 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR9K2Q8NGE7 335 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR52N4Q8NGI2 321 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR10Z1Q8NGY1 313 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR51E1Q8TCB6 317 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 CPT1CQ8TCG5 803 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms