RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MAGEB3O15480 346 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 XRCC2O43543 280 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 ALX3O95076 343 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 HLA-DQB1P01920 261 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 ALDOBP05062 364 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 ANOS1P23352 680 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 ID4P47928 161 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 POU3F4P49335 361 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 INPP1P49441 399 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 PER3P56645 1201 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 CXADRP78310 365 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 MADCAM1Q13477 382 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 ASAH1Q13510 395 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 C1orf185Q5T7R7 199 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 LYPD6Q86Y78 171 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 C19orf18Q8NEA5 215 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 C1orf162Q8NEQ5 155 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-233ENST00000557529 OR51D1Q8NGF3 324 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 SYNPRQ8TBG9 265 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 FAM57AQ8TBR7 257 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 SLC25A28Q96A46 364 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 REEP6Q96HR9 211 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 SOX7Q9BT81 388 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 C1QTNF5Q9BXJ0 243 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 METTL17Q9H7H0 456 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-233ENST00000557529 PLSCR4Q9NRQ2 329 aa10.87□□□□□ -0.67
SHMT2-233ENST00000557529 C5orf63A6NC05 138 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 CTDSPLO15194 276 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 SLC34A2O95436 690 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 SERPINA5P05154 406 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 ARSBP15848 533 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 IGHV1-2P23083 117 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 STOMP27105 288 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-233ENST00000557529 MNDAP41218 407 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 MAP2K3P46734 347 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 HGFACQ04756 655 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 GSG1Q2KHT4 349 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 HIKESHIQ53FT3 197 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 SEMA6DQ8NFY4 1073 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 PTX4Q96A99 478 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 BOD1Q96IK1 185 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 NEK6Q9HC98 313 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-233ENST00000557529 B3GNT2Q9NY97 397 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 CGGBP1Q9UFW8 167 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-233ENST00000557529 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 PROCRQ9UNN8 238 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 PIGLQ9Y2B2 252 aa10.86□□□□□ -0.67
SHMT2-233ENST00000557529 LOC100509620A0A075B734 347 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 CIB4A0PJX0 185 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 A6NIN4 97 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 GSTZ1O43708 216 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 IL2RAP01589 272 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 COX5AP20674 150 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 APLNRP35414 380 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 TIMP3P35625 211 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF93P35789 620 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 MMP15P51511 669 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 UBE2NP61088 152 aaKnown RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 RIPPLY1Q0D2K3 151 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 TAB1Q15750 504 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 TMEM69Q5SWH9 247 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 RTL6Q6ICC9 239 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 CD163Q86VB7 1156 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 OR5AS1Q8N127 324 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 Q8NA96 180 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 OR52N4Q8NGI2 321 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 RFT1Q96AA3 541 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 APOBEC3DQ96AK3 386 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 PHF21AQ96BD5 680 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 POM121L2Q96KW2 1035 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 THAP7Q9BT49 309 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-233ENST00000557529 NOX3Q9HBY0 568 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
SHMT2-233ENST00000557529 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 TMEM272A0A1B0GTI8 110 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 C5orf49A4QMS7 147 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 ZNF503-AS2A6NEH8 195 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 TNFSF13O75888 250 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 BPNT1O95861 308 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 HCKP08631 526 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 PRF1P14222 555 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 FAHP16930 419 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 RAB6AP20340 208 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 HOXC12P31275 282 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 TDGF1P3P51864 188 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 FOXF2Q12947 444 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 MALLQ13021 153 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms