RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CDC14BO60729 498 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 LILRA1O75019 489 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 KRT8P05787 483 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 COL8A2P25067 703 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 GIFP27352 417 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 CRYBB2P43320 205 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 NR4A2P43354 598 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ACTC1P68032 377 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ACTA1P68133 377 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF91Q05481 1191 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF691Q5VV52 312 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 SSX6Q7RTT6 188 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 SETD9Q8NE22 299 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 YIPF5Q969M3 257 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 SGK3Q96BR1 496 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 SLC30A2Q9BRI3 323 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ADI1Q9BV57 179 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 TMEM100Q9NV29 134 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 FAM206AQ9NX38 181 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 MRM2Q9UI43 246 aaKnown RBP11.54□□□□□ -0.56
SHMT2-228ENST00000557302 NOP16Q9Y3C1 178 aaKnown RBP11.54□□□□□ -0.56
SHMT2-228ENST00000557302 C2CD3Q4AC94 2353 aa11.54□□□□□ -0.56
SHMT2-228ENST00000557302 ZANQ9Y493 2812 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 MAGEB4O15481 346 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 RP2O75695 350 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 CLIC3O95833 236 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 DBTP11182 482 aaKnown RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 TNFRSF1AP19438 455 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 USF1P22415 310 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 DDOSTP39656 456 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 TMEM33P57088 247 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 IL18R1Q13478 541 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 RIN1Q13671 783 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 BIVMQ86UB2 503 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 YIPF7Q8N8F6 280 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 MAPK1IP1LQ8NDC0 245 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 OR2V2Q96R30 315 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 SLC22A4Q9H015 551 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF275Q9NSD4 429 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 MRPL15Q9P015 296 aaKnown RBP11.53□□□□□ -0.56
SHMT2-228ENST00000557302 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 ZNF391Q9UJN7 358 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 PCDHGB1Q9Y5G3 927 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 R4GMQ9 66 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
SHMT2-228ENST00000557302 A0A096LNT2 108 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 A0A1B0GWJ7 208 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 METTL15A6NJ78 407 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 LOC110117498-PIK3R3F6TDL0 507 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 H0YAE9 185 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 MLNRO43193 412 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 PPIHO43447 177 aaKnown RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 SULT1C4O75897 302 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 CAPGP40121 348 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 GPR6P46095 362 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 SRP9P49458 86 aaKnown RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 MMP16P51512 607 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 FAM3AP98173 230 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 HFEQ30201 348 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 PLEKHG7Q6ZR37 379 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 FAM220AQ7Z4H9 259 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 NRG4Q8WWG1 115 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 LGALS12Q96DT0 336 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 MOB1AQ9H8S9 216 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 NUFIP1Q9UHK0 495 aaKnown RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 GTF2A1LQ9UNN4 478 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 EXOGQ9Y2C4 368 aaKnown RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 RPL36Q9Y3U8 105 aaKnown RBP11.52□□□□□ -0.57
SHMT2-228ENST00000557302 TLN2Q9Y4G6 2542 aa11.52□□□□□ -0.57
SHMT2-228ENST00000557302 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 DAPL1A0PJW8 107 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 ANKRD30BLA7E2S9 258 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 F5H5P2 479 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 H0YL77 283 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 J3QRE1 110 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 SRSF10O75494 262 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 RPP14O95059 124 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 FADS2O95864 444 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 HLA-DPB1P04440 258 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CA6P23280 308 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 GSK3AP49840 483 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 ZNF85Q03923 595 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 SLC3A1Q07837 685 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 RAB40BQ12829 278 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 OR8G1Q15617 311 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 SNCBQ16143 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms