RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ZCCHC24Q8N2G6 241 aaKnown RBP10.96□□□□□ -0.65
SHMT2-227ENST00000557269 ZFP41Q8N8Y5 198 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 MRPL48Q96GC5 212 aaKnown RBP10.96□□□□□ -0.65
SHMT2-227ENST00000557269 COG8Q96MW5 612 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 SP140LQ9H930 580 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 GPR84Q9NQS5 396 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 TAAR3PQ9P1P4 343 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 PURGQ9UJV8 347 aaKnown RBP10.96□□□□□ -0.65
SHMT2-227ENST00000557269 BLOC1S6Q9UL45 172 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 ERGIC3Q9Y282 383 aa10.96□□□□□ -0.65
SHMT2-227ENST00000557269 CENPEQ02224 2701 aa10.96□□□□□ -0.66
SHMT2-227ENST00000557269 A0A0U1RQV5 110 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 hCG_38984A0A1B0GV85 526 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 A0A1W2PPW3 197 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 OR4C45A6NMZ5 311 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 VSTM5A8MXK1 200 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 B9A039 149 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 H3BSA7 217 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 MYL12BO14950 172 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 XRCC2O43543 280 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 NAT2P11245 290 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 KITLGP21583 273 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 ACKR3P25106 362 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 EVX1P49640 407 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 GSK3AP49840 483 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 MMP15P51511 669 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 GBX2P52951 348 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-227ENST00000557269 WNT4P56705 351 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
SHMT2-227ENST00000557269 PAMR1Q6UXH9 720 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 C20orf204Q6ZNR8 217 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 Q6ZR03 302 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 SPARTQ8N0X7 666 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 BHLHE23Q8NDY6 225 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 OR10AC1Q8NH08 325 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 LURAP1Q96LR2 239 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 PPP1R3EQ9H7J1 279 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 MOB1AQ9H8S9 216 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 FAIMQ9NVQ4 179 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 UNC79Q9P2D8 2635 aa10.95□□□□□ -0.66
SHMT2-227ENST00000557269 ASH1LQ9NR48 2969 aaKnown RBP10.94□□□□□ -0.66
SHMT2-227ENST00000557269 ZSCAN5BA6NJL1 495 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 OVOL3O00110 214 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 OGG1O15527 345 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 TIMM8AO60220 97 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-227ENST00000557269 LMX1BO60663 402 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 ZFPL1O95159 310 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CDKN1AP38936 164 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 TGM4P49221 684 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CCR9P51686 369 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 EMX1Q04741 257 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-227ENST00000557269 SPHARQ15513 63 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 PLPP7Q8NBV4 271 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 OR56B2PQ8NGI1 322 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 RPS4Y2Q8TD47 263 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 FAM71F1Q96KD3 344 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-227ENST00000557269 MYCBPQ99417 103 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CCL19Q99731 98 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 PDCD1LG2Q9BQ51 273 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CACNG6Q9BXT2 260 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 RGCCQ9H4X1 137 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 MSL2Q9HCI7 577 aa10.94□□□□□ -0.66
SHMT2-227ENST00000557269 CACNA1DQ01668 2161 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 APCP25054 2843 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 TRBV2A0A0J9YWF9 115 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 GGT3PA6NGU5 568 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 CYSRT1A8MQ03 144 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 IQCF6A8MYZ5 107 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 NDUFS7O75251 213 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 RAF1P04049 648 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 PCMT1P22061 227 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 CCL1P22362 96 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 MAGEB1P43366 347 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 SNRPD2P62316 118 aaKnown RBP10.93□□□□□ -0.66
SHMT2-227ENST00000557269 CDK5R1Q15078 307 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 MED22Q15528 200 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 OR8B8Q15620 311 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 CCDC58Q4VC31 144 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 SPRNQ5BIV9 151 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 DMKNQ6E0U4 476 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-227ENST00000557269 RPL22L1Q6P5R6 122 aaKnown RBP10.93□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF773Q6PK81 442 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 COMMD2Q86X83 199 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 OR8G5Q8NG78 346 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 OR14K1Q8NGZ2 314 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 RGP1Q92546 391 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-227ENST00000557269 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 ACOT13Q9NPJ3 140 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 TRIM36Q9NQ86 728 aa10.93□□□□□ -0.66
SHMT2-227ENST00000557269 DSCAMO60469 2012 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 PNMA8CA0A1B0GUJ8 204 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 LOC107986453A0A1B0GWG9 222 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 A6NIN4 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms